Os10g0504900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipid transfer protein.
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Os10g0504900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lipid transfer protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.11 | 0.759 | 2.84 | 0.13 | 0.0491 | 1.85 | -0.524 | -7 | -0.131 | 12.2 | 0.138 | 6 | -- | -- |
| 277.97 | 0.782 | 2.82 | 0.148 | 0.0563 | 0.526 | -0.164 | -- | -0.151 | 11.8 | 0.09983 | 5 | -- | -- |
| 259.74 | 0.756 | 2.84 | 0.106 | 0.0725 | 1.99 | -- | -7.02 | -0.139 | 15.4 | 0.000151 | 5 | -- | -- |
| 278.04 | 0.782 | 2.82 | 0.141 | 0.0647 | 0.55 | -- | -- | -0.151 | 13.5 | 0.07238 | 5 | -- | -- |
| 260.02 | 0.755 | 2.84 | 0.105 | -- | 1.95 | -- | -7 | -0.142 | -- | 0.000151 | 5 | -- | -- |
| 280.24 | 0.785 | 2.82 | 0.185 | 0.026 | -- | -0.3 | -- | -0.162 | 10.2 | -- | -- | -- | -- |
| 280.58 | 0.784 | 2.82 | 0.174 | 0.0311 | -- | -- | -- | -0.162 | 12.3 | -- | -- | -- | -- |
| 278.29 | 0.78 | 2.82 | 0.14 | -- | 0.521 | -- | -- | -0.153 | -- | 0.08097 | 5 | -- | -- |
| 278.56 | 0.782 | 2.82 | -- | 0.0638 | 0.575 | -- | -- | -0.166 | 13.5 | 0.09089 | 5 | -- | -- |
| 280.64 | 0.783 | 2.82 | 0.173 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 281.37 | 0.785 | 2.82 | -- | 0.0288 | -- | -- | -- | -0.181 | 12 | -- | -- | -- | -- |
| 278.8 | 0.78 | 2.82 | -- | -- | 0.547 | -- | -- | -0.168 | -- | 0.08843 | 5 | -- | -- |
| 281.43 | 0.783 | 2.82 | -- | -- | -- | -- | -- | -0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.45 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 2 | 245.46 | wind | 7.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 11 | 245.95 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 32 | 250.04 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 62 | 252.23 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 11 |
| 63 | 252.25 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 9 |
| 81 | 255.99 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 84 | 255.99 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 119 | 255.99 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 122 | 255.99 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 157 | 256.15 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 216 | 260.73 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 234 | 262.43 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 18 |
| 240 | 263.09 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 271 | 264.67 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 278 | 265.15 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 298 | 265.99 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 299 | 265.99 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 302 | 266.02 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 17 | 4 |
| 303 | 266.03 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 3 |
| 308 | 266.03 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 17 | 3 |
| 379 | 266.68 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 389 | 266.90 | wind | 1.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 392 | 266.94 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 396 | 266.94 | wind | 1.0 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 421 | 267.30 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 441 | 267.82 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 445 | 267.86 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 472 | 268.40 | wind | 1.0 | 10 | > th | dose independent | sin | 17 | NA |
| 485 | 268.50 | wind | 1.0 | 10 | < th | dose independent | sin | 17 | NA |
| 517 | 269.08 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 526 | 269.35 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 527 | 269.35 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 529 | 269.37 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 545 | 269.52 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 549 | 269.58 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 13 |
| 550 | 269.58 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 555 | 269.59 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 16 |
| 559 | 269.61 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 563 | 269.63 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 3 |
| 582 | 269.84 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 588 | 269.84 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 590 | 269.84 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 605 | 269.84 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 611 | 269.84 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 613 | 269.84 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 665 | 270.07 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 3 |
| 673 | 270.11 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 675 | 270.12 | radiation | 10.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 698 | 270.22 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 700 | 270.24 | radiation | 10.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 710 | 270.32 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 716 | 270.42 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 718 | 270.44 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 722 | 270.56 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 769 | 270.81 | humidity | 60.0 | 10 | < th | dose independent | rect. | 12 | 3 |
| 777 | 270.85 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 793 | 270.99 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 805 | 270.99 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 826 | 271.04 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 900 | 271.41 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 973 | 271.66 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 16 |