Os10g0504500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0504500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.47 | 0.347 | 2.73 | -0.0144 | 0.0592 | -0.188 | -0.147 | 2.62 | 0.179 | 2.34 | 0.2329 | 10 | -- | -- |
| 55.84 | 0.348 | 2.74 | -0.0268 | 0.0493 | 0.348 | -0.0303 | -- | 0.188 | 1.5 | 0.03789 | 8 | -- | -- |
| 54.53 | 0.344 | 2.73 | -0.00794 | 0.0587 | -0.199 | -- | 2.57 | 0.18 | 1.86 | 0.1135 | 9 | -- | -- |
| 55.83 | 0.348 | 2.74 | -0.0274 | 0.0541 | 0.342 | -- | -- | 0.186 | 0.829 | 0.0511 | 8 | -- | -- |
| 54.72 | 0.345 | 2.73 | -0.00877 | -- | -0.155 | -- | 2.54 | 0.182 | -- | 0.1025 | 9 | -- | -- |
| 56.45 | 0.352 | 2.74 | -0.00845 | 0.0731 | -- | 0.0363 | -- | 0.18 | 1.32 | -- | -- | -- | -- |
| 56.46 | 0.352 | 2.74 | -0.00974 | 0.0732 | -- | -- | -- | 0.179 | 1.45 | -- | -- | -- | -- |
| 55.89 | 0.348 | 2.74 | -0.0273 | -- | 0.309 | -- | -- | 0.188 | -- | 1.2 | 8 | -- | -- |
| 55.85 | 0.348 | 2.74 | -- | 0.0543 | 0.336 | -- | -- | 0.189 | 0.817 | 0.08655 | 8 | -- | -- |
| 56.79 | 0.352 | 2.74 | -0.00684 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 56.46 | 0.351 | 2.74 | -- | 0.0731 | -- | -- | -- | 0.18 | 1.44 | -- | -- | -- | -- |
| 55.91 | 0.348 | 2.73 | -- | -- | 0.304 | -- | -- | 0.191 | -- | 1.2 | 8 | -- | -- |
| 56.79 | 0.352 | 2.74 | -- | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.03 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 53.03 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 53.06 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 5 | 53.06 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 53.07 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 53.08 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 13 | 53.09 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 15 | 53.10 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 53.11 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 53.11 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 53.11 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 53.11 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 53.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 53.11 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 36 | 53.11 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 38 | 53.11 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 43 | 53.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 53.24 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 49 | 53.28 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 53.31 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 55 | 53.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 5 |
| 57 | 53.51 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 67 | 53.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 70 | 53.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 74 | 53.60 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 80 | 53.60 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 81 | 53.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 101 | 53.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 104 | 53.60 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 105 | 53.60 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 107 | 53.61 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 108 | 53.61 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 112 | 53.61 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 116 | 53.62 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 119 | 53.63 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 120 | 53.63 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 122 | 53.63 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 123 | 53.63 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 130 | 53.64 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 132 | 53.64 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 133 | 53.64 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 136 | 53.64 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 138 | 53.64 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 140 | 53.64 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 145 | 53.64 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 146 | 53.64 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 148 | 53.64 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 153 | 53.64 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 156 | 53.65 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 158 | 53.66 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 160 | 53.66 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 171 | 53.74 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 173 | 53.75 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 177 | 53.76 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 4 |
| 234 | 53.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 238 | 53.96 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 241 | 53.96 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 288 | 54.08 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 326 | 54.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 327 | 54.13 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 328 | 54.13 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 329 | 54.14 | humidity | 60.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 330 | 54.14 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 343 | 54.18 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 349 | 54.19 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 353 | 54.19 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 365 | 54.20 | wind | 5.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 406 | 54.27 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 411 | 54.27 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 17 |
| 429 | 54.29 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 431 | 54.30 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 2 |
| 441 | 54.31 | wind | 1.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 451 | 54.32 | radiation | 10.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 492 | 54.38 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 517 | 54.41 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 519 | 54.41 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 557 | 54.45 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 570 | 54.49 | wind | 1.0 | 10 | > th | dose independent | sin | 14 | NA |
| 576 | 54.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 594 | 54.50 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 22 |
| 605 | 54.52 | wind | 1.0 | 10 | < th | dose independent | sin | 15 | NA |
| 638 | 54.58 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 647 | 54.59 | wind | 1.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 649 | 54.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 650 | 54.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 656 | 54.59 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 658 | 54.59 | radiation | 1.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 662 | 54.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 16 | 1 |
| 663 | 54.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 665 | 54.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 676 | 54.61 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 720 | 54.65 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 732 | 54.66 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 733 | 54.66 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 744 | 54.68 | wind | 9.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 755 | 54.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 759 | 54.70 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 768 | 54.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 804 | 54.72 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 813 | 54.73 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 2 |
| 896 | 54.76 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 975 | 54.79 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 13 |