Os10g0502500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome b5 domain containing protein.
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Os10g0502500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome b5 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.23 | 0.254 | 13.9 | -0.421 | 0.135 | 0.242 | -0.779 | 2.84 | 0.0682 | 20.3 | 29.1 | 1775 | -- | -- |
| 31.05 | 0.26 | 13.9 | 0.194 | 0.142 | 0.51 | -0.726 | -- | 0.12 | 21.1 | 29.9 | 1742 | -- | -- |
| 30.97 | 0.259 | 13.9 | -0.434 | 0.149 | 0.232 | -- | 3.21 | 0.0572 | 20.6 | 29.3 | 1874 | -- | -- |
| 32.69 | 0.266 | 13.9 | 0.269 | 0.159 | 0.613 | -- | -- | 0.123 | 20.8 | 29.8 | 1900 | -- | -- |
| 32.06 | 0.264 | 13.9 | -0.47 | -- | 0.197 | -- | 3.25 | 0.0512 | -- | 29.38 | 1755 | -- | -- |
| 41.36 | 0.302 | 13.8 | 0.0954 | 0.0964 | -- | -0.893 | -- | 0.18 | 20.2 | -- | -- | -- | -- |
| 43.79 | 0.31 | 13.8 | 0.121 | 0.0973 | -- | -- | -- | 0.179 | 20.8 | -- | -- | -- | -- |
| 33.91 | 0.271 | 13.9 | 0.271 | -- | 0.562 | -- | -- | 0.112 | -- | 30 | 1739 | -- | -- |
| 34.51 | 0.274 | 13.9 | -- | 0.16 | 0.567 | -- | -- | 0.102 | 20.6 | 29.89 | 1924 | -- | -- |
| 44.33 | 0.311 | 13.8 | 0.121 | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
| 44.17 | 0.311 | 13.8 | -- | 0.0971 | -- | -- | -- | 0.166 | 20.9 | -- | -- | -- | -- |
| 35.67 | 0.278 | 13.9 | -- | -- | 0.508 | -- | -- | 0.0911 | -- | 29.92 | 1742 | -- | -- |
| 44.71 | 0.312 | 13.8 | -- | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.15 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 12 | 28.39 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 28 | 28.51 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 16 |
| 59 | 28.67 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 68 | 28.71 | temperature | 15.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 109 | 28.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 175 | 29.07 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 181 | 29.09 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 183 | 29.09 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 283 | 29.31 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 309 | 29.37 | temperature | 20.0 | 720 | > th | dose dependent | no | NA | NA |
| 316 | 29.38 | temperature | 30.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 346 | 29.42 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 347 | 29.42 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 348 | 29.42 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 403 | 29.52 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 416 | 29.53 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 490 | 29.61 | temperature | 20.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 491 | 29.61 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 502 | 29.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 503 | 29.62 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 533 | 29.63 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 548 | 29.64 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 571 | 29.67 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 583 | 29.68 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 584 | 29.68 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 587 | 29.69 | temperature | 10.0 | 720 | > th | dose dependent | no | NA | NA |
| 615 | 29.72 | temperature | 25.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 677 | 29.79 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 680 | 29.79 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 727 | 29.83 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 772 | 29.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 790 | 29.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 10 |
| 800 | 29.89 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 807 | 29.89 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 820 | 29.90 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 825 | 29.91 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 855 | 29.93 | temperature | 20.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 924 | 29.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 10 |