Os10g0502100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0502100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.4 | 0.584 | 5.7 | -2.44 | 1.63 | -1.91 | -0.374 | -1.01 | -0.045 | 5.7 | 0.507 | 1408 | -- | -- |
| 154.75 | 0.579 | 5.72 | -2.52 | 1.63 | -1.69 | -0.367 | -- | -0.0619 | 5.61 | 0.5975 | 1413 | -- | -- |
| 154.71 | 0.579 | 5.7 | -2.44 | 1.63 | -1.91 | -- | -0.993 | -0.046 | 5.63 | 0.5135 | 1413 | -- | -- |
| 155.07 | 0.58 | 5.72 | -2.53 | 1.63 | -1.68 | -- | -- | -0.061 | 5.59 | 0.5974 | 1413 | -- | -- |
| 291.17 | 0.795 | 5.7 | -2.27 | -- | -2.19 | -- | -2.1 | 0.000154 | -- | 0.4798 | 1426 | -- | -- |
| 185.55 | 0.639 | 5.67 | -2.11 | 1.64 | -- | -0.254 | -- | 0.145 | 5.35 | -- | -- | -- | -- |
| 185.7 | 0.638 | 5.67 | -2.11 | 1.63 | -- | -- | -- | 0.147 | 5.34 | -- | -- | -- | -- |
| 292.4 | 0.796 | 5.74 | -2.48 | -- | -1.73 | -- | -- | -0.0319 | -- | 0.6701 | 1423 | -- | -- |
| 295.07 | 0.8 | 5.64 | -- | 1.59 | -0.554 | -- | -- | 0.284 | 5.68 | 10 | 1376 | -- | -- |
| 324.82 | 0.842 | 5.69 | -2.05 | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
| 302.85 | 0.814 | 5.62 | -- | 1.6 | -- | -- | -- | 0.381 | 5.4 | -- | -- | -- | -- |
| 425.34 | 0.961 | 5.67 | -- | -- | -0.611 | -- | -- | 0.3 | -- | 10 | 1414 | -- | -- |
| 435.94 | 0.975 | 5.64 | -- | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 4 | 150.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 10 | 150.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 13 |
| 31 | 152.02 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 48 | 152.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 77 | 153.69 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 89 | 153.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 132 | 154.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 133 | 154.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 143 | 154.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 180 | 155.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 194 | 155.28 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 204 | 155.41 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 228 | 155.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 245 | 155.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 19 |
| 247 | 155.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 249 | 155.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 252 | 155.65 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 258 | 155.69 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 14 |
| 263 | 155.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 265 | 155.73 | radiation | 1 | 1440 | < th | dose dependent | sin | 16 | NA |
| 283 | 155.84 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 318 | 156.10 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 323 | 156.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 324 | 156.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 326 | 156.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 328 | 156.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 335 | 156.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 339 | 156.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 345 | 156.19 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 349 | 156.19 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 360 | 156.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 369 | 156.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 371 | 156.24 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 374 | 156.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 382 | 156.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 406 | 156.28 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 442 | 156.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 444 | 156.40 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 461 | 156.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 529 | 156.67 | radiation | 1 | 1440 | > th | dose independent | sin | 17 | NA |
| 554 | 156.74 | humidity | 90 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 606 | 156.93 | radiation | 1 | 1440 | < th | dose independent | sin | 17 | NA |
| 611 | 156.94 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 612 | 156.95 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 624 | 156.97 | radiation | 40 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 629 | 156.99 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 673 | 157.14 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 717 | 157.31 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 752 | 157.43 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 812 | 157.56 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 14 |
| 818 | 157.57 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 835 | 157.62 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 10 |
| 840 | 157.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 844 | 157.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 846 | 157.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 855 | 157.67 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 856 | 157.68 | radiation | 40 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 861 | 157.71 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 884 | 157.74 | radiation | 40 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 887 | 157.75 | radiation | 40 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 891 | 157.76 | temperature | 10 | 30 | > th | dose dependent | sin | 8 | NA |
| 906 | 157.77 | radiation | 40 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 912 | 157.78 | radiation | 40 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 925 | 157.80 | radiation | 40 | 14400 | < th | dose independent | rect. | 19 | 14 |