Os10g0501500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF607 family protein.
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Os10g0501500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF607 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.28 | 0.597 | 11.1 | 0.116 | 2.29 | -1.51 | -1.49 | 1.69 | 0.0704 | 8.2 | 19.87 | 387 | -- | -- |
| 162.05 | 0.593 | 11.1 | -0.163 | 2.28 | -1.54 | -1.82 | -- | -0.0233 | 7.91 | 17 | 529 | -- | -- |
| 167.21 | 0.602 | 11.1 | 0.216 | 2.29 | -1.54 | -- | 2.31 | 0.0777 | 8.08 | 19.01 | 476 | -- | -- |
| 171.69 | 0.61 | 11.1 | -0.219 | 2.3 | -1.53 | -- | -- | -0.0227 | 7.94 | 16.7 | 525 | -- | -- |
| 350.51 | 0.872 | 11 | 1.35 | -- | -3.53 | -- | 8.08 | 0.439 | -- | 24.04 | 581 | -- | -- |
| 197.51 | 0.659 | 11.2 | -0.557 | 2.75 | -- | -1.57 | -- | -0.276 | 7.74 | -- | -- | -- | -- |
| 204.59 | 0.67 | 11.2 | -0.597 | 2.74 | -- | -- | -- | -0.274 | 7.76 | -- | -- | -- | -- |
| 377.21 | 0.905 | 11.2 | -0.00823 | -- | -2.86 | -- | -- | 0.063 | -- | 24.1 | 564 | -- | -- |
| 172.82 | 0.612 | 11.1 | -- | 2.26 | -1.63 | -- | -- | 0.0164 | 7.96 | 16.59 | 526 | -- | -- |
| 611.58 | 1.16 | 11.2 | -0.563 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 213.99 | 0.684 | 11.1 | -- | 2.74 | -- | -- | -- | -0.208 | 7.78 | -- | -- | -- | -- |
| 377.18 | 0.905 | 11.2 | -- | -- | -2.86 | -- | -- | 0.0648 | -- | 24.1 | 567 | -- | -- |
| 619.94 | 1.16 | 11.2 | -- | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 10 | 158.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 13 | 158.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 62 | 161.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 71 | 161.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 112 | 162.62 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 125 | 162.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 14 |
| 131 | 162.87 | temperature | 25 | 720 | > th | dose independent | rect. | 24 | 19 |
| 136 | 163.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 137 | 163.04 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 138 | 163.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 168 | 163.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 15 |
| 178 | 163.48 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 183 | 163.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 219 | 163.71 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 18 |
| 220 | 163.72 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 20 |
| 244 | 163.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 21 |
| 252 | 163.87 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 260 | 163.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 275 | 163.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 277 | 163.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 285 | 163.99 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 287 | 164.00 | temperature | 25 | 720 | < th | dose independent | sin | 4 | NA |
| 316 | 164.13 | temperature | 30 | 30 | < th | dose independent | rect. | 20 | 20 |
| 328 | 164.19 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 393 | 164.42 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 445 | 164.55 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 16 |
| 673 | 165.11 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 12 |
| 845 | 165.39 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 919 | 165.51 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 10 |