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Os10g0501200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.16 (0.0229) R2 : 0.884
β1 : 2.45 (0.0844) R2dD : 0.226 R2D : 0.196
β2 : 2.21 (0.072) R2dC : 0.359 R2C : 0.531
β3 : 1.27 (0.0813) R2dE : 0.0932 R2E : 0.305
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.625 (0.049) R2dN8 : 0.056 R2N8 : -0.0132
σ : 0.428
deviance : 84.58
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_____
C
peak time of C : 17
E
wheather : wind
threshold : 7
memory length : 265
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 6.9
open length of G : 20.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.53 0.429 8.16 2.44 2.21 1.28 0.351 0.447 0.628 17 7 266 6.98 20
83.8 0.426 8.16 2.47 2.21 1.27 0.591 -- 0.635 17 7.1 264 7 20
83.73 0.426 8.16 2.43 2.21 1.29 -- 0.661 0.628 17 6.953 263 6.9 20.1
84.58 0.428 8.16 2.45 2.21 1.27 -- -- 0.625 17 7 265 6.9 20.1
109.92 0.488 8.14 2.6 -- 3.08 -- 0.981 0.575 -- 33.95 550 5.68 14.9
119.18 0.512 8.19 2.59 2.89 -- 0.956 -- 0.566 17.5 -- -- -- --
121.44 0.516 8.19 2.59 2.9 -- -- -- 0.57 17.5 -- -- -- --
111.75 0.492 8.14 2.62 -- 3.09 -- -- 0.575 -- 36.05 549 5.66 14.9
188.59 0.64 8.23 -- 2.49 1.69 -- -- 0.496 17.4 8.225 11747 7.07 20.3
559.39 1.11 8.15 2.49 -- -- -- -- 0.499 -- -- -- -- --
297.85 0.807 8.26 -- 2.86 -- -- -- 0.282 17.5 -- -- -- --
292.09 0.796 8.2 -- -- 3.03 -- -- 0.28 -- 41.65 555 5.78 14.6
722.97 1.26 8.21 -- -- -- -- -- 0.223 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.70 wind 7.0 270 < th dose independent rect. 7 20
2 85.37 wind 7.0 270 < th dose independent rect. 8 18
5 86.18 radiation 40.0 270 < th dose dependent rect. 15 16
6 86.30 radiation 20.0 270 < th dose dependent rect. 3 6
13 86.68 radiation 20.0 270 < th dose independent rect. 2 7
21 87.55 atmosphere 1000.0 90 > th dose dependent rect. 4 4
23 87.72 precipitation 0.1 270 < th dose independent rect. 3 4
24 87.72 precipitation 0.1 270 < th dose dependent rect. 3 4
25 87.73 wind 5.0 270 < th dose independent rect. 3 4
26 87.82 precipitation 0.1 270 < th dose independent rect. 7 20
27 87.82 precipitation 0.1 270 < th dose dependent rect. 7 20
28 87.84 radiation 10.0 270 < th dose dependent rect. 3 17
31 87.87 radiation 20.0 270 < th dose independent rect. 15 16
44 88.28 humidity 50.0 90 > th dose dependent rect. 4 18
45 88.29 wind 7.0 270 < th dose independent rect. 7 10
47 88.30 temperature 10.0 270 > th dose independent rect. 3 4
49 88.30 temperature 30.0 270 < th dose independent rect. 3 4
50 88.30 humidity 50.0 270 > th dose independent rect. 3 4
52 88.30 atmosphere 995.0 270 > th dose independent rect. 3 4
53 88.30 atmosphere 1015.0 270 < th dose independent rect. 3 4
54 88.30 radiation 30.0 270 < th dose independent rect. 3 4
56 88.30 temperature 10.0 270 > th dose independent rect. 7 20
77 88.75 wind 9.0 270 < th dose dependent rect. 7 20
78 88.78 radiation 1.0 270 < th dose independent rect. 3 16
81 88.84 humidity 50.0 270 > th dose independent rect. 16 15
83 88.91 radiation 40.0 90 < th dose independent rect. 4 19
86 88.93 radiation 10.0 270 < th dose dependent rect. 2 19
95 89.10 humidity 70.0 90 > th dose independent rect. 4 7
103 89.21 humidity 70.0 90 > th dose independent rect. 4 18
114 89.47 humidity 50.0 10 > th dose dependent rect. 5 17
115 89.48 precipitation 0.1 90 < th dose independent rect. 9 19
117 89.48 precipitation 0.1 90 < th dose dependent rect. 9 19
118 89.50 radiation 40.0 90 < th dose dependent rect. 4 19
127 89.63 precipitation 0.1 270 < th dose independent rect. 2 6
128 89.63 precipitation 0.1 270 < th dose dependent rect. 2 6
145 89.77 atmosphere 1005.0 270 > th dose independent rect. 4 2
146 89.78 atmosphere 1010.0 270 < th dose independent rect. 4 2
151 89.86 humidity 70.0 10 > th dose independent rect. 5 17
154 89.88 atmosphere 1005.0 270 > th dose independent rect. 3 4
161 89.88 temperature 10.0 90 > th dose independent rect. 9 19
168 89.91 temperature 10.0 270 > th dose independent rect. 4 2
170 89.91 temperature 30.0 270 < th dose independent rect. 4 2
171 89.91 humidity 50.0 270 > th dose independent rect. 4 2
174 89.91 atmosphere 995.0 270 > th dose independent rect. 4 2
176 89.91 radiation 20.0 270 < th dose independent rect. 4 2
179 89.91 temperature 10.0 270 > th dose independent rect. 6 22
201 90.02 wind 9.0 270 < th dose dependent rect. 3 4
207 90.13 radiation 40.0 270 < th dose dependent rect. 4 2
213 90.17 temperature 10.0 270 > th dose independent rect. 2 6
215 90.17 temperature 30.0 270 < th dose independent rect. 2 6
216 90.17 humidity 50.0 270 > th dose independent rect. 2 6
218 90.17 atmosphere 995.0 270 > th dose independent rect. 2 6
219 90.17 atmosphere 1015.0 270 < th dose independent rect. 2 6
272 90.53 humidity 50.0 270 > th dose dependent rect. 3 4
287 90.62 wind 9.0 270 < th dose dependent rect. 4 2
293 90.72 precipitation 0.1 270 < th dose independent rect. 7 10
294 90.72 precipitation 0.1 270 < th dose dependent rect. 7 10
301 90.78 humidity 50.0 270 > th dose dependent rect. 21 5
302 90.79 atmosphere 995.0 270 > th dose dependent rect. 22 4
310 90.84 wind 1.0 270 > th dose independent rect. 3 4
320 90.93 radiation 20.0 90 < th dose independent rect. 4 19
331 91.02 atmosphere 1000.0 10 > th dose dependent rect. 5 3
337 91.06 wind 7.0 270 < th dose independent rect. 21 5
341 91.12 temperature 15.0 270 > th dose independent rect. 2 19
348 91.15 temperature 10.0 270 > th dose dependent rect. 3 4
351 91.16 atmosphere 1015.0 270 < th dose independent rect. 2 19
360 91.28 atmosphere 1000.0 270 > th dose independent rect. 22 4
364 91.31 atmosphere 995.0 270 > th dose independent rect. 7 20
368 91.36 humidity 50.0 90 > th dose dependent rect. 4 7
382 91.37 wind 7.0 270 < th dose independent rect. 20 7
390 91.42 temperature 10.0 270 > th dose independent rect. 7 10
391 91.42 atmosphere 1015.0 270 < th dose independent rect. 7 10
392 91.42 temperature 10.0 270 > th dose independent rect. 17 14
425 91.58 precipitation 0.1 270 < th dose independent rect. 21 5
426 91.58 precipitation 0.1 270 < th dose dependent rect. 21 5
436 91.61 humidity 50.0 270 > th dose dependent rect. 2 18
438 91.62 humidity 50.0 270 > th dose dependent rect. 22 3
443 91.66 temperature 10.0 270 > th dose independent rect. 21 5
444 91.66 temperature 30.0 270 < th dose independent rect. 21 5
445 91.66 humidity 50.0 270 > th dose independent rect. 21 5
449 91.66 radiation 1.0 270 < th dose independent rect. 21 5
456 91.66 radiation 1.0 270 < th dose dependent rect. 21 5
466 91.69 temperature 10.0 270 > th dose dependent rect. 4 2
475 91.76 radiation 1.0 270 > th dose independent rect. 7 10
496 91.84 precipitation 0.1 270 < th dose independent rect. 20 7
497 91.84 precipitation 0.1 270 < th dose dependent rect. 20 7
513 91.91 radiation 1.0 270 < th dose dependent rect. 20 7
514 91.92 temperature 10.0 270 > th dose independent rect. 20 7
515 91.92 temperature 30.0 270 < th dose independent rect. 20 7
516 91.92 humidity 50.0 270 > th dose independent rect. 20 7
519 91.92 atmosphere 995.0 270 > th dose independent rect. 20 7
520 91.92 radiation 1.0 270 < th dose independent rect. 20 7
535 91.93 humidity 50.0 270 > th dose dependent rect. 4 2
564 92.10 radiation 40.0 10 < th dose dependent rect. 5 17
579 92.19 humidity 50.0 270 > th dose dependent rect. 2 7
621 92.31 humidity 50.0 270 > th dose dependent rect. 20 7
655 92.40 wind 9.0 270 < th dose independent rect. 17 14
656 92.41 wind 9.0 270 < th dose dependent rect. 21 5
700 92.57 precipitation 0.1 270 < th dose independent rect. 2 19
703 92.57 precipitation 0.1 270 < th dose dependent rect. 2 19
723 92.63 radiation 40.0 270 < th dose independent rect. 2 19
730 92.65 temperature 15.0 270 > th dose independent rect. 13 9
732 92.66 atmosphere 1005.0 10 > th dose independent rect. 5 4
737 92.69 atmosphere 995.0 90 > th dose independent rect. 9 19
741 92.70 precipitation 0.1 270 < th dose independent rect. 3 17
742 92.70 precipitation 0.1 270 < th dose dependent rect. 3 17
773 92.82 wind 9.0 270 < th dose dependent rect. 7 8
873 93.01 wind 9.0 270 < th dose dependent rect. 22 3
879 93.03 precipitation 0.1 270 < th dose independent rect. 17 14
881 93.03 precipitation 0.1 270 < th dose dependent rect. 17 14
884 93.06 atmosphere 995.0 270 > th dose independent rect. 7 9
891 93.08 atmosphere 995.0 270 > th dose independent rect. 17 14
892 93.08 humidity 50.0 270 > th dose independent rect. 2 19
910 93.13 temperature 10.0 1440 > th dose independent rect. 5 5
913 93.13 atmosphere 995.0 1440 > th dose independent rect. 5 5
914 93.13 atmosphere 1015.0 1440 < th dose independent rect. 5 5
915 93.13 temperature 10.0 1440 > th dose independent rect. 10 19
922 93.16 wind 9.0 270 < th dose independent rect. 22 15
939 93.25 atmosphere 1010.0 270 < th dose independent rect. 13 9
941 93.25 wind 9.0 10 < th dose dependent rect. 5 4
967 93.32 temperature 30.0 270 < th dose independent rect. 16 15
987 93.38 atmosphere 995.0 90 > th dose independent rect. 4 18