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Os10g0500700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glutaredoxin-related protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0163) R2 : 0.015
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0908 (0.0344) R2dN8 : 0.0194 R2N8 : 0.015
σ : 0.308
deviance : 43.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.31 0.212 13.2 0.613 0.367 -0.451 0.259 -0.243 0.132 8.33 80.88 1219 -- --
20.37 0.21 13.2 0.631 0.364 -0.468 0.277 -- 0.132 8.3 81 1203 -- --
20.41 0.21 13.2 0.607 0.349 -0.464 -- -0.368 0.126 8.01 81.35 1158 -- --
20.56 0.211 13.2 0.642 0.354 -0.493 -- -- 0.133 8.01 81.11 1183 -- --
23.64 0.226 13.2 0.567 -- -0.648 -- -0.454 0.159 -- 105.4 830 -- --
25.17 0.235 13.2 0.55 0.402 -- 0.426 -- 0.151 9.2 -- -- -- --
25.76 0.238 13.2 0.564 0.404 -- -- -- 0.151 8.92 -- -- -- --
23.93 0.228 13.2 0.6 -- -0.666 -- -- 0.165 -- 121.7 806 -- --
27.02 0.242 13.2 -- 0.337 -0.585 -- -- 0.147 8.39 89.17 28470 -- --
35.11 0.277 13.2 0.564 -- -- -- -- 0.153 -- -- -- -- --
34.16 0.273 13.2 -- 0.405 -- -- -- 0.0878 8.82 -- -- -- --
33.38 0.269 13.2 -- -- -0.636 -- -- 0.0972 -- 219.9 786 -- --
43.51 0.308 13.2 -- -- -- -- -- 0.0908 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.08 humidity 50.0 90 > th dose dependent rect. 19 8
2 19.11 temperature 15.0 90 > th dose independent rect. 19 8
3 19.11 precipitation 0.1 90 < th dose independent rect. 3 16
4 19.11 precipitation 0.1 90 < th dose dependent rect. 3 16
5 19.15 atmosphere 1000.0 90 > th dose independent rect. 19 8
7 19.22 temperature 30.0 90 < th dose independent rect. 19 8
8 19.22 humidity 50.0 90 > th dose independent rect. 19 8
11 19.22 radiation 1.0 90 < th dose independent rect. 19 8
16 19.22 temperature 10.0 90 > th dose independent rect. 3 16
17 19.22 atmosphere 1015.0 90 < th dose independent rect. 3 16
18 19.22 radiation 1.0 90 < th dose dependent rect. 19 8
23 19.23 wind 9.0 90 < th dose independent rect. 19 8
26 19.38 wind 9.0 90 < th dose independent rect. 3 16
27 19.42 humidity 70.0 720 > th dose independent rect. 17 8
29 19.51 precipitation 0.1 270 < th dose independent rect. 14 15
30 19.51 precipitation 0.1 270 < th dose dependent rect. 14 15
31 19.53 precipitation 0.1 90 < th dose independent rect. 19 8
33 19.53 precipitation 0.1 90 < th dose dependent rect. 19 8
34 19.54 precipitation 0.1 10 < th dose independent rect. 3 17
35 19.54 precipitation 0.1 10 < th dose dependent rect. 3 17
36 19.55 humidity 80.0 1440 < th dose dependent rect. 15 14
39 19.56 humidity 80.0 1440 < th dose dependent sin 13 NA
41 19.57 humidity 90.0 1440 < th dose dependent rect. 15 6
53 19.61 atmosphere 995.0 90 > th dose independent rect. 3 16
57 19.62 humidity 50.0 1440 > th dose dependent rect. 15 6
84 19.69 humidity 50.0 270 > th dose dependent rect. 17 8
96 19.72 humidity 80.0 720 < th dose dependent rect. 18 3
104 19.74 humidity 50.0 1440 > th dose dependent rect. 18 3
114 19.77 humidity 70.0 720 > th dose independent sin 12 NA
123 19.78 temperature 10.0 10 > th dose dependent rect. 20 7
131 19.80 atmosphere 1015.0 90 < th dose independent rect. 19 8
132 19.80 humidity 70.0 720 > th dose independent rect. 17 14
144 19.82 humidity 60.0 1440 > th dose dependent rect. 19 1
145 19.82 humidity 90.0 1440 < th dose dependent rect. 19 1
149 19.83 temperature 25.0 270 < th dose independent rect. 1 4
158 19.84 atmosphere 1000.0 10 > th dose independent rect. 20 7
160 19.84 humidity 50.0 90 > th dose independent rect. 3 16
168 19.85 temperature 15.0 10 > th dose independent rect. 20 7
232 19.95 humidity 70.0 1440 > th dose independent rect. 14 14
248 19.96 humidity 90.0 1440 < th dose dependent rect. 16 1
253 19.96 humidity 50.0 10 > th dose dependent rect. 20 7
258 19.97 humidity 70.0 720 < th dose independent rect. 17 3
263 19.97 humidity 70.0 1440 > th dose independent rect. 14 6
292 19.98 temperature 25.0 720 > th dose dependent rect. 18 1
309 20.00 temperature 30.0 10 < th dose independent rect. 20 7
310 20.00 temperature 25.0 270 < th dose independent rect. 23 7
311 20.00 humidity 50.0 10 > th dose independent rect. 20 7
315 20.00 radiation 1.0 10 < th dose independent rect. 20 7
320 20.00 temperature 10.0 10 > th dose independent rect. 3 17
322 20.00 atmosphere 1015.0 10 < th dose independent rect. 3 17
326 20.00 radiation 1.0 10 < th dose dependent rect. 20 7
335 20.01 wind 9.0 10 < th dose independent rect. 20 7
344 20.01 atmosphere 995.0 90 > th dose dependent rect. 19 8
349 20.02 temperature 25.0 720 > th dose dependent rect. 17 4
357 20.03 humidity 50.0 1440 > th dose dependent rect. 16 1
412 20.06 humidity 50.0 10 > th dose independent rect. 3 17
418 20.06 humidity 50.0 720 > th dose dependent rect. 15 16
422 20.07 temperature 30.0 720 < th dose independent rect. 17 8
423 20.07 temperature 15.0 270 > th dose independent rect. 5 9
439 20.09 humidity 80.0 1440 < th dose independent rect. 19 1
440 20.09 wind 9.0 270 < th dose independent rect. 5 9
453 20.10 humidity 70.0 1440 < th dose independent sin 14 NA
454 20.10 humidity 70.0 1440 < th dose independent rect. 14 6
474 20.11 precipitation 0.1 270 < th dose independent rect. 5 9
478 20.11 radiation 10.0 10 < th dose independent rect. 3 17
480 20.11 precipitation 0.1 270 < th dose dependent rect. 5 9
487 20.12 precipitation 0.1 270 < th dose independent rect. 3 1
495 20.12 precipitation 0.1 270 < th dose dependent rect. 3 1
523 20.13 wind 9.0 270 < th dose independent rect. 14 15
527 20.13 humidity 50.0 1440 > th dose dependent sin 17 NA
538 20.14 atmosphere 995.0 270 > th dose independent rect. 5 9
539 20.14 atmosphere 1015.0 270 < th dose independent rect. 5 9
546 20.14 temperature 10.0 270 > th dose independent rect. 14 15
589 20.17 temperature 20.0 30 > th dose independent rect. 12 8
607 20.18 precipitation 0.1 10 < th dose independent rect. 20 7
619 20.18 precipitation 0.1 10 < th dose dependent rect. 20 7
628 20.18 radiation 20.0 90 < th dose dependent rect. 3 16
631 20.19 humidity 80.0 1440 > th dose independent rect. 19 2
636 20.19 radiation 1.0 270 < th dose independent rect. 15 10
654 20.20 wind 7.0 270 < th dose dependent rect. 1 4
656 20.20 radiation 10.0 270 < th dose dependent rect. 16 9
662 20.21 wind 5.0 270 < th dose independent rect. 1 4
681 20.23 atmosphere 1015.0 10 < th dose independent rect. 20 7
682 20.23 wind 1.0 10 > th dose independent rect. 12 8
764 20.27 humidity 50.0 720 > th dose dependent sin 14 NA
768 20.27 temperature 10.0 270 > th dose dependent rect. 11 8
787 20.29 wind 5.0 270 < th dose independent rect. 3 1
818 20.30 radiation 10.0 1440 > th dose independent rect. 15 3
834 20.30 temperature 15.0 10 > th dose independent rect. 20 16
835 20.30 atmosphere 995.0 10 > th dose independent rect. 3 17
836 20.30 wind 7.0 270 < th dose dependent rect. 3 1
852 20.31 precipitation 0.1 270 < th dose independent rect. 1 4
853 20.31 radiation 10.0 1440 > th dose independent rect. 17 13
858 20.31 wind 7.0 90 < th dose dependent rect. 3 4
859 20.31 precipitation 0.1 270 < th dose dependent rect. 1 4
874 20.32 wind 7.0 10 < th dose dependent rect. 3 5
890 20.33 wind 9.0 270 < th dose dependent rect. 6 8
904 20.34 radiation 40.0 270 < th dose independent rect. 14 15
905 20.34 precipitation 0.1 270 < th dose independent rect. 1 16
922 20.34 precipitation 0.1 270 < th dose dependent rect. 1 16
924 20.34 radiation 20.0 10 < th dose dependent rect. 3 17
926 20.35 atmosphere 995.0 270 > th dose independent rect. 17 8
940 20.36 wind 5.0 270 < th dose independent rect. 23 7
966 20.37 radiation 1.0 270 < th dose dependent rect. 5 20
968 20.38 radiation 10.0 1440 > th dose independent rect. 17 1
973 20.38 precipitation 0.1 90 < th dose independent rect. 3 4
992 20.38 precipitation 0.1 90 < th dose dependent rect. 3 4