Os10g0498800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF974 family protein.
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Os10g0498800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF974 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.81 | 0.277 | 9.02 | -0.228 | 0.427 | 0.621 | -0.422 | 0.223 | -0.217 | 5.85 | 71 | 6849 | -- | -- |
| 34.85 | 0.275 | 9.02 | -0.234 | 0.413 | 0.621 | -0.414 | -- | -0.227 | 5.69 | 70.98 | 7011 | -- | -- |
| 35.22 | 0.276 | 9.02 | -0.219 | 0.423 | 0.61 | -- | 0.203 | -0.221 | 5.62 | 71 | 7011 | -- | -- |
| 35.25 | 0.277 | 9.02 | -0.24 | 0.408 | 0.617 | -- | -- | -0.226 | 5.59 | 70.94 | 7031 | -- | -- |
| 43.84 | 0.308 | 9.03 | -0.217 | -- | 0.629 | -- | 0.212 | -0.217 | -- | 70.5 | 7030 | -- | -- |
| 41.06 | 0.3 | 8.99 | -0.296 | 0.426 | -- | -0.342 | -- | -0.115 | 5.44 | -- | -- | -- | -- |
| 41.35 | 0.301 | 8.99 | -0.297 | 0.424 | -- | -- | -- | -0.114 | 5.35 | -- | -- | -- | -- |
| 43.88 | 0.309 | 9.02 | -0.225 | -- | 0.64 | -- | -- | -0.203 | -- | 69.86 | 7039 | -- | -- |
| 36.56 | 0.282 | 9.01 | -- | 0.407 | 0.585 | -- | -- | -0.182 | 5.78 | 69 | 8362 | -- | -- |
| 50.72 | 0.333 | 9 | -0.282 | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
| 43.67 | 0.309 | 8.98 | -- | 0.419 | -- | -- | -- | -0.0808 | 5.37 | -- | -- | -- | -- |
| 45 | 0.312 | 9.01 | -- | -- | 0.606 | -- | -- | -0.182 | -- | 68 | 8473 | -- | -- |
| 52.82 | 0.339 | 8.99 | -- | -- | -- | -- | -- | -0.0721 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.64 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 4 | 34.69 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 5 | 34.69 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 15 | 34.71 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 16 | 34.71 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 24 | 34.78 | humidity | 70 | 14400 | < th | dose dependent | sin | 12 | NA |
| 27 | 34.79 | humidity | 70 | 14400 | < th | dose independent | sin | 11 | NA |
| 54 | 34.85 | humidity | 70 | 14400 | > th | dose independent | sin | 11 | NA |
| 55 | 34.85 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 57 | 34.85 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 67 | 34.85 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 77 | 34.87 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 78 | 34.87 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 79 | 34.87 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 173 | 34.95 | humidity | 60 | 14400 | > th | dose independent | sin | 15 | NA |
| 199 | 34.96 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 209 | 34.96 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 20 |
| 214 | 34.96 | humidity | 80 | 14400 | < th | dose dependent | rect. | 10 | 12 |
| 251 | 34.97 | humidity | 80 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 265 | 34.98 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 313 | 34.99 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 9 |
| 399 | 35.01 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 462 | 35.02 | humidity | 80 | 14400 | < th | dose dependent | no | NA | NA |
| 522 | 35.04 | humidity | 80 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 544 | 35.06 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 606 | 35.09 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 640 | 35.10 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 654 | 35.11 | humidity | 60 | 14400 | < th | dose independent | sin | 15 | NA |
| 702 | 35.12 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 711 | 35.13 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 717 | 35.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 729 | 35.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 732 | 35.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 733 | 35.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 19 |
| 737 | 35.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 1 | 21 |
| 742 | 35.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 865 | 35.16 | humidity | 80 | 14400 | > th | dose independent | rect. | 19 | 2 |