Os10g0498700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0498700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : WD40-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.83 | 0.204 | 11.6 | 0.629 | 0.111 | -0.506 | -0.295 | 2.16 | 0.456 | 6.7 | 29.9 | 4318 | -- | -- |
| 19.22 | 0.204 | 11.6 | 1.01 | 0.107 | -0.265 | -0.281 | -- | 0.442 | 6.81 | 28.9 | 4368 | -- | -- |
| 19.02 | 0.203 | 11.6 | 0.631 | 0.111 | -0.49 | -- | 2.03 | 0.441 | 6.59 | 29.7 | 4319 | -- | -- |
| 19.42 | 0.205 | 11.6 | 1 | 0.108 | -0.26 | -- | -- | 0.444 | 6.56 | 29 | 4397 | -- | -- |
| 19.65 | 0.206 | 11.6 | 0.652 | -- | -0.483 | -- | 1.93 | 0.445 | -- | 29.79 | 4280 | -- | -- |
| 21.49 | 0.217 | 11.6 | 1.08 | 0.109 | -- | -0.279 | -- | 0.45 | 6.49 | -- | -- | -- | -- |
| 21.67 | 0.218 | 11.6 | 1.08 | 0.109 | -- | -- | -- | 0.451 | 6.06 | -- | -- | -- | -- |
| 20.01 | 0.208 | 11.6 | 1.01 | -- | -0.258 | -- | -- | 0.446 | -- | 29.01 | 4332 | -- | -- |
| 22.2 | 0.219 | 11.6 | -- | 0.106 | -0.843 | -- | -- | 0.107 | 6.46 | 19.4 | 47520 | -- | -- |
| 22.28 | 0.221 | 11.6 | 1.08 | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
| 52.4 | 0.339 | 11.6 | -- | 0.125 | -- | -- | -- | 0.331 | 5.63 | -- | -- | -- | -- |
| 22.79 | 0.222 | 11.6 | -- | -- | -0.846 | -- | -- | 0.104 | -- | 19.37 | 47520 | -- | -- |
| 53.21 | 0.34 | 11.6 | -- | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 3 | 18.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 4 | 18.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 6 | 18.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 7 | 18.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 9 | 18.55 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 21 | 18.57 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 22 | 18.57 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 27 | 18.58 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 34 | 18.59 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 38 | 18.60 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 54 | 18.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 10 |
| 94 | 18.66 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 120 | 18.68 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 124 | 18.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 154 | 18.70 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 174 | 18.71 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 204 | 18.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 224 | 18.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 236 | 18.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 242 | 18.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 10 |
| 266 | 18.74 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 275 | 18.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 288 | 18.75 | temperature | 20 | 4320 | > th | dose independent | sin | 19 | NA |
| 293 | 18.75 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 326 | 18.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 7 | 9 |
| 332 | 18.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 18 |
| 377 | 18.77 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 401 | 18.78 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 406 | 18.78 | temperature | 20 | 4320 | > th | dose dependent | sin | 11 | NA |
| 443 | 18.79 | temperature | 20 | 4320 | < th | dose independent | sin | 19 | NA |
| 451 | 18.79 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 514 | 18.80 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 612 | 18.82 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 21 |
| 689 | 18.83 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 768 | 18.85 | temperature | 30 | 4320 | < th | dose independent | sin | 23 | NA |
| 777 | 18.85 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 21 |
| 780 | 18.85 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 785 | 18.85 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 811 | 18.86 | temperature | 30 | 4320 | < th | dose independent | sin | 21 | NA |
| 850 | 18.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 22 |
| 853 | 18.86 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 910 | 18.87 | temperature | 30 | 4320 | < th | dose independent | rect. | 7 | 18 |
| 915 | 18.87 | temperature | 30 | 4320 | < th | dose independent | rect. | 7 | 21 |
| 946 | 18.88 | temperature | 30 | 4320 | > th | dose independent | sin | 23 | NA |
| 950 | 18.88 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 953 | 18.88 | humidity | 90 | 14400 | > th | dose independent | rect. | 10 | 1 |