Os10g0494300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABC transporter.
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Os10g0494300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABC transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.32 | 0.201 | 3.1 | 0.156 | 0.0606 | 0.189 | 0.0014 | 0.784 | -0.0839 | 9.79 | 89.73 | 6000 | -- | -- |
| 19.21 | 0.204 | 3.09 | 0.115 | 0.0774 | 0.21 | -0.000764 | -- | -0.0948 | 9.9 | 89 | 6541 | -- | -- |
| 18.32 | 0.199 | 3.1 | 0.16 | 0.0609 | 0.188 | -- | 0.785 | -0.0845 | 9.78 | 91 | 5998 | -- | -- |
| 19.21 | 0.204 | 3.09 | 0.111 | 0.0731 | 0.204 | -- | -- | -0.0963 | 9.34 | 88.89 | 6353 | -- | -- |
| 18.54 | 0.201 | 3.1 | 0.159 | -- | 0.192 | -- | 0.775 | -0.087 | -- | 91 | 5929 | -- | -- |
| 19.77 | 0.208 | 3.09 | 0.0926 | 0.0577 | -- | 0.0119 | -- | -0.0584 | 10.2 | -- | -- | -- | -- |
| 19.77 | 0.208 | 3.09 | 0.0929 | 0.0578 | -- | -- | -- | -0.0584 | 10 | -- | -- | -- | -- |
| 19.38 | 0.205 | 3.1 | 0.104 | -- | 0.207 | -- | -- | -0.0977 | -- | 88.02 | 5872 | -- | -- |
| 19.48 | 0.206 | 3.1 | -- | 0.0562 | 0.198 | -- | -- | -0.107 | 9.86 | 87.42 | 5849 | -- | -- |
| 19.97 | 0.209 | 3.09 | 0.0922 | -- | -- | -- | -- | -0.0585 | -- | -- | -- | -- | -- |
| 20 | 0.209 | 3.09 | -- | 0.0575 | -- | -- | -- | -0.0688 | 9.91 | -- | -- | -- | -- |
| 19.66 | 0.207 | 3.1 | -- | -- | 0.2 | -- | -- | -0.105 | -- | 87.02 | 5859 | -- | -- |
| 20.2 | 0.21 | 3.09 | -- | -- | -- | -- | -- | -0.0687 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.27 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 11 |
| 4 | 18.28 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 7 | 18.31 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 9 | 18.34 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 21 | 18.42 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 32 | 18.43 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 33 | 18.43 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 38 | 18.44 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 54 | 18.46 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 55 | 18.46 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 57 | 18.47 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 59 | 18.47 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 61 | 18.47 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 12 | 3 |
| 70 | 18.48 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 73 | 18.49 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 80 | 18.50 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 81 | 18.50 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 88 | 18.50 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 91 | 18.51 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 95 | 18.51 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 163 | 18.52 | humidity | 70.0 | 4320 | > th | dose independent | sin | 2 | NA |
| 173 | 18.52 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 8 |
| 270 | 18.54 | humidity | 70.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 273 | 18.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 293 | 18.54 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 297 | 18.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 303 | 18.54 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 2 | 14 |
| 356 | 18.55 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 4 | 12 |
| 401 | 18.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 477 | 18.57 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 550 | 18.58 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 14 | 23 |
| 551 | 18.58 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 555 | 18.58 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 588 | 18.59 | humidity | 70.0 | 4320 | > th | dose independent | no | NA | NA |
| 594 | 18.59 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 629 | 18.59 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 667 | 18.59 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 722 | 18.60 | humidity | 70.0 | 4320 | < th | dose independent | no | NA | NA |
| 831 | 18.60 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 839 | 18.60 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 0 | NA |
| 899 | 18.61 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 14 | 4 |
| 925 | 18.61 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 927 | 18.61 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 16 | 23 |
| 931 | 18.61 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 937 | 18.61 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 965 | 18.61 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 20 |