Os10g0493300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0493300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.96 | 0.465 | 12.2 | -1.71 | 1.06 | 1.53 | 0.437 | -0.948 | -0.198 | 22.4 | 15.92 | 1356 | -- | -- |
| 98.31 | 0.462 | 12.1 | -1.54 | 1.05 | 1.4 | 0.405 | -- | -0.129 | 22.4 | 15.81 | 2667 | -- | -- |
| 98.72 | 0.463 | 12.2 | -1.72 | 1.06 | 1.51 | -- | -0.913 | -0.2 | 22.5 | 16.1 | 1374 | -- | -- |
| 98.78 | 0.463 | 12.1 | -1.61 | 1.03 | 1.5 | -- | -- | -0.16 | 22.4 | 14.8 | 2655 | -- | -- |
| 135.73 | 0.543 | 12.1 | -1.69 | -- | 2.18 | -- | -0.45 | -0.228 | -- | 16.2 | 878 | -- | -- |
| 142.84 | 0.56 | 12.1 | -0.985 | 1.13 | -- | 0.449 | -- | 0.156 | 22.8 | -- | -- | -- | -- |
| 143.68 | 0.561 | 12.1 | -1 | 1.12 | -- | -- | -- | 0.154 | 22.8 | -- | -- | -- | -- |
| 136.08 | 0.543 | 12.1 | -1.6 | -- | 2.16 | -- | -- | -0.204 | -- | 16.08 | 878 | -- | -- |
| 150.83 | 0.572 | 12.1 | -- | 1.03 | 0.905 | -- | -- | 0.118 | 22.4 | 16.96 | 1238 | -- | -- |
| 221.97 | 0.696 | 12.1 | -0.98 | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
| 170.21 | 0.61 | 12.1 | -- | 1.12 | -- | -- | -- | 0.266 | 22.7 | -- | -- | -- | -- |
| 195.91 | 0.652 | 12.1 | -- | -- | 1.52 | -- | -- | 0.0521 | -- | 17 | 845 | -- | -- |
| 247.33 | 0.734 | 12 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 2 | 86.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 3 | 87.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 4 | 87.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 9 | 87.60 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 17 | 87.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 18 | 87.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 24 | 88.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 31 | 88.30 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 57 | 88.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 8 |
| 84 | 89.08 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 109 | 89.35 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 12 |
| 112 | 89.36 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 129 | 89.51 | wind | 7.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 170 | 90.03 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 23 | 13 |
| 171 | 90.05 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 174 | 90.08 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 178 | 90.10 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 187 | 90.13 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 198 | 90.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 10 |
| 221 | 90.34 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 241 | 90.51 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 243 | 90.54 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 252 | 90.62 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 275 | 90.77 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 327 | 91.10 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 334 | 91.15 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 359 | 91.27 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 391 | 91.43 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 460 | 91.76 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 501 | 92.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 504 | 92.00 | wind | 5.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 505 | 92.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 513 | 92.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 533 | 92.11 | humidity | 90.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 545 | 92.13 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 562 | 92.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 575 | 92.24 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 581 | 92.32 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 591 | 92.37 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 618 | 92.49 | humidity | 90.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 628 | 92.54 | wind | 7.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 644 | 92.60 | wind | 7.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 793 | 93.21 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 809 | 93.30 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 836 | 93.38 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 853 | 93.46 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 6 | NA |
| 855 | 93.46 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 6 | NA |
| 862 | 93.48 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 6 | NA |
| 864 | 93.49 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 882 | 93.50 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 884 | 93.52 | radiation | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 896 | 93.56 | radiation | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 901 | 93.57 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 926 | 93.68 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 948 | 93.75 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 957 | 93.78 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 959 | 93.79 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 983 | 93.82 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 997 | 93.84 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 4 |