Os10g0492800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallophosphoesterase domain containing protein.
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Os10g0492800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallophosphoesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.84 | 0.261 | 12.1 | -0.909 | 1.83 | 0.815 | -0.473 | -0.571 | -0.234 | 9.51 | 0.7963 | 231 | -- | -- |
| 31.72 | 0.262 | 12.1 | -0.939 | 1.86 | 0.817 | -0.0239 | -- | -0.24 | 9.51 | 0.94 | 212 | -- | -- |
| 31.25 | 0.26 | 12.1 | -0.931 | 1.85 | 0.822 | -- | -0.302 | -0.235 | 9.52 | 0.8811 | 218 | -- | -- |
| 31.72 | 0.262 | 12.1 | -0.939 | 1.85 | 0.805 | -- | -- | -0.243 | 9.49 | 0.9501 | 212 | -- | -- |
| 68.13 | 0.384 | 12.1 | -1.14 | -- | 1.53 | -- | -2.73 | -0.323 | -- | 1.924 | 847 | -- | -- |
| 35.97 | 0.281 | 12.1 | -1 | 1.63 | -- | -0.214 | -- | -0.281 | 7.43 | -- | -- | -- | -- |
| 36.1 | 0.281 | 12.1 | -1.01 | 1.63 | -- | -- | -- | -0.281 | 7.44 | -- | -- | -- | -- |
| 38.95 | 0.291 | 12.1 | -0.759 | -- | 2.36 | -- | -- | -0.168 | -- | 0.54 | 916 | -- | -- |
| 54.45 | 0.344 | 12 | -- | 1.95 | 1 | -- | -- | -0.11 | 9.96 | 0.4341 | 216 | -- | -- |
| 177.42 | 0.622 | 12.1 | -0.981 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 62.78 | 0.371 | 12.1 | -- | 1.62 | -- | -- | -- | -0.169 | 7.48 | -- | -- | -- | -- |
| 53.15 | 0.34 | 12.1 | -- | -- | 2.49 | -- | -- | -0.0736 | -- | 0.2179 | 931 | -- | -- |
| 202.78 | 0.665 | 12.1 | -- | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.19 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 2 | 27.27 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 27.52 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 4 | 27.68 | radiation | 30 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 8 | 27.75 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 14 | 27.89 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 24 | 27.96 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 43 | 27.99 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 46 | 28.01 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 85 | 28.06 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 132 | 28.11 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 133 | 28.12 | radiation | 40 | 43200 | > th | dose independent | sin | 3 | NA |
| 136 | 28.12 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 154 | 28.13 | radiation | 40 | 43200 | > th | dose independent | sin | 1 | NA |
| 177 | 28.14 | wind | 3 | 14400 | > th | dose dependent | rect. | 2 | 14 |
| 202 | 28.16 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 364 | 28.18 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 378 | 28.21 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 392 | 28.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 457 | 28.26 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 464 | 28.27 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 482 | 28.27 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 622 | 28.37 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 705 | 28.41 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 791 | 28.45 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 840 | 28.47 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |