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Os10g0491900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : D111/G-patch domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0133) R2 : 7.52e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00518 (0.028) R2dN8 : 9.71e-05 R2N8 : 7.52e-05
σ : 0.25
deviance : 28.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.26 0.177 12.5 -0.318 0.431 0.291 0.337 0.727 -0.0255 4.33 72 2663 -- --
14.92 0.18 12.5 -0.242 0.415 0.347 0.275 -- -0.00352 4.35 73 2646 -- --
14.56 0.178 12.5 -0.317 0.434 0.288 -- 0.688 -0.0282 4.45 71.92 2663 -- --
15.12 0.181 12.4 -0.221 0.448 0.365 -- -- 0.0104 4.43 72.36 2626 -- --
22.27 0.221 12.5 -0.265 -- 0.239 -- 0.453 -0.0393 -- 68 9084 -- --
18.46 0.201 12.5 -0.259 0.401 -- 0.225 -- -0.0417 4.79 -- -- -- --
18.59 0.202 12.5 -0.26 0.403 -- -- -- -0.0428 4.85 -- -- -- --
21.56 0.217 12.5 -0.225 -- 0.23 -- -- -0.0256 -- 74 3318 -- --
16.35 0.188 12.4 -- 0.434 0.395 -- -- 0.0279 4.33 72.53 2621 -- --
27.16 0.244 12.5 -0.245 -- -- -- -- -0.0324 -- -- -- -- --
20.37 0.211 12.4 -- 0.398 -- -- -- -0.0138 4.87 -- -- -- --
20.51 0.211 12.4 -- -- 0.559 -- -- 0.0491 -- 71.14 1905 -- --
28.74 0.25 12.5 -- -- -- -- -- -0.00518 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.18 temperature 30 270 < th dose dependent rect. 5 8
10 12.58 temperature 25 270 < th dose independent rect. 6 5
25 12.93 humidity 60 14400 > th dose independent rect. 17 1
33 13.06 humidity 60 14400 < th dose independent rect. 17 1
45 13.14 temperature 15 270 > th dose dependent rect. 2 15
59 13.25 humidity 70 14400 < th dose dependent rect. 17 2
66 13.29 temperature 30 270 < th dose dependent rect. 9 1
72 13.33 humidity 60 14400 < th dose independent rect. 16 3
76 13.34 temperature 10 270 > th dose dependent sin 2 NA
78 13.34 temperature 30 270 < th dose dependent sin 2 NA
89 13.40 humidity 60 14400 < th dose independent rect. 16 16
92 13.41 humidity 60 14400 < th dose independent rect. 16 5
103 13.41 humidity 70 14400 < th dose dependent rect. 17 15
146 13.53 humidity 60 14400 > th dose independent rect. 17 15
150 13.54 humidity 60 14400 > th dose independent rect. 17 6
195 13.60 wind 3 43200 > th dose independent rect. 2 2
196 13.60 wind 3 43200 > th dose independent rect. 2 5
200 13.61 temperature 25 14400 > th dose independent rect. 10 1
201 13.61 temperature 25 14400 < th dose independent rect. 10 1
203 13.62 temperature 30 14400 > th dose independent rect. 17 1
204 13.62 wind 3 43200 < th dose independent rect. 2 2
212 13.64 wind 3 43200 > th dose dependent rect. 6 1
224 13.67 wind 3 43200 < th dose independent rect. 2 5
225 13.67 temperature 20 14400 > th dose dependent rect. 17 1
226 13.67 radiation 40 1440 < th dose dependent rect. 17 7
231 13.68 temperature 25 14400 > th dose independent rect. 2 13
236 13.69 temperature 25 14400 > th dose independent rect. 4 10
252 13.70 radiation 40 1440 < th dose dependent rect. 17 11
255 13.71 temperature 25 14400 < th dose independent rect. 4 10
262 13.71 temperature 10 14400 > th dose dependent rect. 17 1
273 13.72 temperature 25 14400 < th dose independent rect. 7 5
279 13.72 humidity 50 14400 > th dose dependent rect. 17 2
310 13.74 humidity 90 14400 < th dose dependent rect. 17 1
317 13.75 temperature 30 14400 < th dose independent rect. 17 1
320 13.75 temperature 25 14400 > th dose independent rect. 7 6
328 13.75 radiation 1 1440 > th dose dependent rect. 17 1
333 13.76 temperature 25 14400 > th dose independent sin 3 NA
392 13.78 temperature 25 14400 < th dose independent sin 2 NA
409 13.78 temperature 30 14400 < th dose dependent rect. 17 1
472 13.80 radiation 20 1440 < th dose dependent rect. 17 1
538 13.82 humidity 90 14400 < th dose independent rect. 21 2
557 13.82 radiation 10 1440 > th dose independent rect. 17 13
585 13.83 temperature 30 14400 < th dose independent rect. 17 7
620 13.84 temperature 25 14400 > th dose independent rect. 10 11
655 13.85 temperature 25 14400 < th dose independent rect. 7 14
669 13.85 temperature 30 14400 > th dose dependent rect. 17 1
683 13.85 radiation 10 1440 < th dose dependent rect. 17 15
732 13.86 temperature 25 14400 < th dose independent rect. 10 11
740 13.86 temperature 25 14400 > th dose independent rect. 7 13
858 13.88 temperature 25 14400 > th dose independent rect. 10 20
892 13.89 temperature 25 270 > th dose independent rect. 6 11
932 13.90 humidity 60 14400 < th dose independent sin 13 NA
985 13.91 humidity 90 14400 < th dose independent rect. 17 1