Os10g0489500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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Os10g0489500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.39 | 0.408 | 2.87 | -0.000368 | 0.155 | -1.75 | -0.185 | -0.516 | 0.0672 | 6.42 | 8.949 | 29 | -- | -- |
| 75.4 | 0.404 | 2.87 | -0.00327 | 0.155 | -1.62 | -0.186 | -- | 0.0676 | 6.4 | 8.966 | 28 | -- | -- |
| 75.47 | 0.405 | 2.87 | -0.00402 | 0.154 | -1.73 | -- | -0.533 | 0.0672 | 6.7 | 8.951 | 28 | -- | -- |
| 75.48 | 0.405 | 2.87 | -0.00692 | 0.154 | -1.59 | -- | -- | 0.0676 | 6.71 | 8.961 | 28 | -- | -- |
| 75.78 | 0.405 | 2.87 | 0.0396 | -- | -2.14 | -- | -1.57 | 0.0836 | -- | 9.105 | 22 | -- | -- |
| 81.65 | 0.424 | 2.88 | -0.101 | 0.131 | -- | -0.0156 | -- | 0.0329 | 7.92 | -- | -- | -- | -- |
| 81.65 | 0.423 | 2.88 | -0.102 | 0.131 | -- | -- | -- | 0.0329 | 7.92 | -- | -- | -- | -- |
| 75.39 | 0.404 | 2.87 | 0.00426 | -- | -1.79 | -- | -- | 0.0735 | -- | 9.147 | 18 | -- | -- |
| 75.48 | 0.405 | 2.87 | -- | 0.154 | -1.59 | -- | -- | 0.0685 | 6.7 | 8.961 | 28 | -- | -- |
| 82.58 | 0.425 | 2.88 | -0.1 | -- | -- | -- | -- | 0.0347 | -- | -- | -- | -- | -- |
| 81.92 | 0.423 | 2.87 | -- | 0.13 | -- | -- | -- | 0.0443 | 7.97 | -- | -- | -- | -- |
| 75.39 | 0.404 | 2.87 | -- | -- | -1.79 | -- | -- | 0.073 | -- | 9.146 | 18 | -- | -- |
| 82.84 | 0.425 | 2.88 | -- | -- | -- | -- | -- | 0.0458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.98 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 29 | 69.65 | wind | 9 | 30 | > th | dose dependent | rect. | 19 | 17 |
| 31 | 69.71 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 1 |
| 100 | 70.53 | wind | 9 | 30 | > th | dose dependent | sin | 6 | NA |
| 105 | 70.87 | wind | 9 | 30 | > th | dose independent | rect. | 19 | 17 |
| 111 | 71.19 | wind | 9 | 30 | < th | dose independent | sin | 6 | NA |
| 118 | 71.39 | wind | 9 | 30 | > th | dose independent | sin | 6 | NA |
| 119 | 71.39 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 286 | 73.65 | radiation | 10 | 270 | < th | dose independent | rect. | 9 | 1 |
| 390 | 74.67 | radiation | 20 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 405 | 74.88 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 445 | 75.17 | radiation | 20 | 10 | < th | dose independent | rect. | 10 | 3 |
| 533 | 75.43 | wind | 5 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 597 | 75.64 | radiation | 30 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 653 | 75.76 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 9 |
| 774 | 76.00 | wind | 7 | 270 | > th | dose independent | rect. | 8 | 1 |
| 857 | 76.14 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 867 | 76.15 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 991 | 76.28 | wind | 9 | 30 | > th | dose independent | no | NA | NA |