Os10g0488800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myosin head, motor region domain containing protein.
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Os10g0488800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Myosin head, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.73 | 0.214 | 12.8 | -0.22 | 1.18 | -0.399 | -0.357 | 0.19 | 0.275 | 4.34 | 1.566 | 93 | -- | -- |
| 20.89 | 0.213 | 12.8 | -0.228 | 1.19 | -0.388 | -0.478 | -- | 0.272 | 4.26 | 1.611 | 92 | -- | -- |
| 21.02 | 0.214 | 12.8 | -0.219 | 1.18 | -0.387 | -- | 0.291 | 0.264 | 4.27 | 1.529 | 93 | -- | -- |
| 21.58 | 0.216 | 12.8 | -0.227 | 1.19 | -0.382 | -- | -- | 0.271 | 4.28 | 1.61 | 92 | -- | -- |
| 31.46 | 0.261 | 12.8 | -0.284 | -- | -1.33 | -- | 1.28 | 0.366 | -- | 1.76 | 450 | -- | -- |
| 23.06 | 0.225 | 12.8 | -0.239 | 1.49 | -- | -0.424 | -- | 0.241 | 3.32 | -- | -- | -- | -- |
| 23.63 | 0.228 | 12.8 | -0.231 | 1.49 | -- | -- | -- | 0.244 | 3.32 | -- | -- | -- | -- |
| 27.2 | 0.243 | 12.8 | -0.168 | -- | -1.37 | -- | -- | 0.309 | -- | 1.44 | 447 | -- | -- |
| 22.88 | 0.223 | 12.8 | -- | 1.18 | -0.373 | -- | -- | 0.281 | 4.24 | 1.56 | 93 | -- | -- |
| 149 | 0.57 | 12.8 | -0.167 | -- | -- | -- | -- | 0.283 | -- | -- | -- | -- | -- |
| 25.03 | 0.234 | 12.8 | -- | 1.49 | -- | -- | -- | 0.269 | 3.32 | -- | -- | -- | -- |
| 27.61 | 0.245 | 12.8 | -- | -- | -1.41 | -- | -- | 0.333 | -- | 0.83 | 455 | -- | -- |
| 149.74 | 0.571 | 12.8 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.31 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 2 | 20.34 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 3 | 20.41 | wind | 1.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 4 | 20.46 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 8 | 20.51 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 5 |
| 10 | 20.52 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 13 | 20.55 | temperature | 25.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 15 | 20.55 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 16 | 20.55 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 18 | 20.56 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 19 | 20.57 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 21 | 20.58 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 23 | 20.58 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 26 | 20.59 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 30 | 20.60 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 1 |
| 32 | 20.60 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 33 | 20.60 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 36 | 20.61 | radiation | 1.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 37 | 20.61 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 38 | 20.62 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 39 | 20.62 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 40 | 20.62 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 41 | 20.62 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 42 | 20.63 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 43 | 20.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 45 | 20.63 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 46 | 20.63 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 50 | 20.63 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 52 | 20.63 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 57 | 20.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 58 | 20.63 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 59 | 20.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 65 | 20.64 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 69 | 20.64 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 80 | 20.66 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 83 | 20.67 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 86 | 20.68 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 88 | 20.68 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 91 | 20.69 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 23 |
| 109 | 20.72 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 111 | 20.72 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 115 | 20.74 | radiation | 1.0 | 90 | > th | dose independent | sin | 1 | NA |
| 116 | 20.74 | radiation | 1.0 | 90 | < th | dose independent | sin | 1 | NA |
| 117 | 20.74 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 121 | 20.75 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 13 |
| 188 | 20.81 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 22 | 9 |
| 196 | 20.84 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 19 | 11 |
| 205 | 20.88 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 207 | 20.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 210 | 20.88 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 214 | 20.88 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 223 | 20.88 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 224 | 20.88 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 225 | 20.88 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 234 | 20.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 244 | 20.90 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 248 | 20.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 12 | 19 |
| 260 | 20.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 22 |
| 261 | 20.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 264 | 20.93 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 268 | 20.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 286 | 20.95 | radiation | 1.0 | 90 | > th | dose independent | no | NA | NA |
| 287 | 20.95 | radiation | 1.0 | 90 | < th | dose independent | no | NA | NA |
| 304 | 20.95 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 370 | 20.96 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 23 |
| 371 | 20.96 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 375 | 20.96 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 20 |
| 379 | 20.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 23 |
| 384 | 20.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 400 | 20.99 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 414 | 21.02 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 423 | 21.02 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 425 | 21.02 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 433 | 21.03 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 442 | 21.04 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 461 | 21.06 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 463 | 21.07 | temperature | 15.0 | 10 | > th | dose independent | rect. | 19 | 11 |
| 470 | 21.08 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 485 | 21.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 495 | 21.10 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 496 | 21.10 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 19 | 11 |
| 497 | 21.10 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 22 | 12 |
| 516 | 21.11 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 525 | 21.12 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 6 |
| 532 | 21.13 | radiation | 10.0 | 720 | > th | dose independent | rect. | 13 | 3 |
| 534 | 21.13 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 541 | 21.13 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 549 | 21.13 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 556 | 21.14 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 583 | 21.15 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 585 | 21.16 | humidity | 80.0 | 720 | < th | dose independent | rect. | 13 | 4 |
| 586 | 21.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 6 |
| 589 | 21.16 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 594 | 21.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 6 |
| 611 | 21.17 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 20 | 13 |
| 614 | 21.17 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 615 | 21.17 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 642 | 21.18 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 22 | 5 |
| 648 | 21.19 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 656 | 21.20 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 657 | 21.20 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 15 |
| 658 | 21.20 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 660 | 21.20 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 11 | 9 |
| 662 | 21.20 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 12 |
| 669 | 21.21 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 671 | 21.21 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 676 | 21.21 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 685 | 21.22 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 691 | 21.22 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 695 | 21.22 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 705 | 21.23 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 6 |
| 720 | 21.24 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 721 | 21.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 724 | 21.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 729 | 21.24 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 734 | 21.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 735 | 21.24 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 737 | 21.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 741 | 21.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 771 | 21.25 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 22 |
| 780 | 21.25 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 11 | 18 |
| 788 | 21.25 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 797 | 21.26 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 807 | 21.26 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 813 | 21.27 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 20 | 5 |
| 836 | 21.28 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 839 | 21.28 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 883 | 21.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 23 |
| 910 | 21.30 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 933 | 21.31 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 952 | 21.31 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 3 |
| 959 | 21.31 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 970 | 21.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 995 | 21.33 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 22 | 5 |
| 999 | 21.33 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 23 |