Os10g0488100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1).
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Os10g0488100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.64 | 0.219 | 10.8 | 0.382 | 0.33 | -0.498 | -0.114 | 0.981 | 0.176 | 22.8 | 19.1 | 2802 | -- | -- |
| 22.78 | 0.222 | 10.7 | 0.536 | 0.348 | -0.71 | -0.0926 | -- | 0.188 | 22.3 | 18.8 | 2750 | -- | -- |
| 21.68 | 0.217 | 10.8 | 0.389 | 0.326 | -0.496 | -- | 0.977 | 0.177 | 22.8 | 19.1 | 2741 | -- | -- |
| 22.48 | 0.221 | 10.7 | 0.484 | 0.33 | -0.787 | -- | -- | 0.203 | 22.7 | 18.7 | 2775 | -- | -- |
| 27.59 | 0.245 | 10.8 | 0.37 | -- | -0.552 | -- | 0.909 | 0.171 | -- | 19.13 | 2386 | -- | -- |
| 31.15 | 0.262 | 10.7 | 0.851 | 0.338 | -- | -0.123 | -- | 0.35 | 23.1 | -- | -- | -- | -- |
| 31.21 | 0.262 | 10.7 | 0.857 | 0.339 | -- | -- | -- | 0.35 | 23 | -- | -- | -- | -- |
| 28.31 | 0.248 | 10.7 | 0.479 | -- | -0.784 | -- | -- | 0.208 | -- | 18.6 | 2393 | -- | -- |
| 25.4 | 0.235 | 10.7 | -- | 0.322 | -1.04 | -- | -- | 0.103 | 22.6 | 18 | 10722 | -- | -- |
| 38.38 | 0.289 | 10.7 | 0.864 | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
| 50.55 | 0.333 | 10.7 | -- | 0.347 | -- | -- | -- | 0.255 | 23.2 | -- | -- | -- | -- |
| 31.18 | 0.26 | 10.7 | -- | -- | -0.926 | -- | -- | 0.109 | -- | 15.7 | 42576 | -- | -- |
| 58.08 | 0.356 | 10.7 | -- | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.66 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 2 | 20.84 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 4 | 21.05 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 5 | 21.09 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 6 | 21.16 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 8 | 21.22 | wind | 3 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 10 | 21.23 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 13 | 21.24 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 14 | 21.24 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 23 | 21.27 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 24 | 21.27 | wind | 3 | 43200 | > th | dose dependent | sin | 5 | NA |
| 31 | 21.29 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 39 | 21.30 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 47 | 21.31 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 58 | 21.32 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 64 | 21.33 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 68 | 21.33 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 6 |
| 78 | 21.34 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 94 | 21.35 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 98 | 21.36 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 148 | 21.41 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 168 | 21.42 | wind | 9 | 43200 | < th | dose dependent | sin | 6 | NA |
| 198 | 21.44 | wind | 7 | 43200 | > th | dose independent | sin | 5 | NA |
| 216 | 21.45 | wind | 7 | 43200 | < th | dose independent | sin | 5 | NA |
| 218 | 21.45 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 270 | 21.49 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 273 | 21.49 | radiation | 10 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 303 | 21.50 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 19 |
| 350 | 21.54 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 361 | 21.54 | wind | 9 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 371 | 21.54 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 394 | 21.56 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 418 | 21.57 | wind | 3 | 43200 | > th | dose dependent | sin | 10 | NA |
| 432 | 21.58 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 461 | 21.59 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 474 | 21.59 | wind | 1 | 43200 | > th | dose dependent | rect. | 21 | 9 |
| 483 | 21.60 | temperature | 20 | 14400 | < th | dose independent | sin | 15 | NA |
| 688 | 21.68 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 689 | 21.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 907 | 21.76 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 10 | 18 |