Os10g0487500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0487500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.99 | 0.257 | 9.34 | -0.0371 | 0.516 | 1.23 | -0.392 | 4.53 | -0.104 | 23.9 | 0.7194 | 1405 | -- | -- |
| 36.13 | 0.28 | 9.26 | 0.351 | 0.466 | 0.4 | -0.823 | -- | -0.00121 | 23.7 | 27.45 | 2671 | -- | -- |
| 30.28 | 0.256 | 9.34 | -0.0348 | 0.578 | 1.28 | -- | 4.78 | -0.111 | 23.8 | 0.6881 | 1385 | -- | -- |
| 38.66 | 0.29 | 9.25 | 0.379 | 0.459 | 0.396 | -- | -- | 0.0149 | 23.8 | 55.16 | 2724 | -- | -- |
| 42.98 | 0.307 | 9.26 | 0.409 | -- | 0.241 | -- | -0.704 | -0.0551 | -- | 0.6881 | 1385 | -- | -- |
| 39.87 | 0.296 | 9.27 | 0.343 | 0.382 | -- | -0.84 | -- | -0.07 | 23.9 | -- | -- | -- | -- |
| 42.93 | 0.307 | 9.27 | 0.376 | 0.386 | -- | -- | -- | -0.0664 | 23.9 | -- | -- | -- | -- |
| 40.95 | 0.298 | 9.25 | 0.358 | -- | 0.726 | -- | -- | 0.00919 | -- | 6.499 | 1672 | -- | -- |
| 42.55 | 0.304 | 9.27 | -- | 0.394 | 0.364 | -- | -- | -0.045 | 0.0403 | 57.7 | 2969 | -- | -- |
| 52.3 | 0.338 | 9.26 | 0.388 | -- | -- | -- | -- | -0.0611 | -- | -- | -- | -- | -- |
| 46.66 | 0.32 | 9.28 | -- | 0.391 | -- | -- | -- | -0.108 | 0.00434 | -- | -- | -- | -- |
| 44.82 | 0.312 | 9.25 | -- | -- | 0.698 | -- | -- | -0.0159 | -- | 10 | 1690 | -- | -- |
| 56.27 | 0.35 | 9.27 | -- | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 4 | 28.88 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 6 | 28.92 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 7 | 28.93 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 11 | 28.98 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 12 | 29.01 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 17 | 29.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 23 | 29.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 24 | 29.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 25 | 29.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 28 | 29.24 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 29 | 29.24 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 36 | 29.27 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 55 | 29.36 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 67 | 29.37 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 69 | 29.37 | wind | 1 | 43200 | > th | dose dependent | rect. | 2 | 8 |
| 90 | 29.42 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 10 |
| 110 | 29.48 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 113 | 29.49 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 117 | 29.49 | wind | 9 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 122 | 29.50 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 129 | 29.51 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 11 |
| 145 | 29.53 | wind | 3 | 43200 | > th | dose dependent | sin | 5 | NA |
| 182 | 29.59 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 188 | 29.60 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 191 | 29.60 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 214 | 29.62 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 220 | 29.63 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 236 | 29.65 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 246 | 29.67 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 250 | 29.68 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 290 | 29.73 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 296 | 29.73 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 317 | 29.77 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 326 | 29.77 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 393 | 29.85 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 417 | 29.88 | wind | 7 | 43200 | > th | dose independent | sin | 5 | NA |
| 419 | 29.88 | wind | 3 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 427 | 29.88 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 473 | 29.94 | wind | 7 | 43200 | < th | dose independent | sin | 5 | NA |
| 476 | 29.94 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 484 | 29.95 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 487 | 29.95 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 595 | 30.06 | temperature | 20 | 43200 | > th | dose independent | sin | 19 | NA |
| 625 | 30.08 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 652 | 30.10 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 713 | 30.15 | temperature | 20 | 43200 | < th | dose independent | sin | 19 | NA |
| 721 | 30.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 728 | 30.16 | temperature | 20 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 751 | 30.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 824 | 30.23 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 836 | 30.23 | radiation | 1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 888 | 30.26 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 891 | 30.26 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 923 | 30.27 | temperature | 20 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 939 | 30.28 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 940 | 30.28 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 960 | 30.28 | wind | 9 | 43200 | < th | dose dependent | sin | 7 | NA |
| 961 | 30.28 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 987 | 30.30 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 999 | 30.30 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 1 |