Os10g0487200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0487200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312.68 | 0.831 | 3.06 | 0.853 | 0.159 | -3.02 | 0.909 | 15.2 | -0.0501 | 23.7 | 48 | 187 | -- | -- |
| 333.11 | 0.857 | 3.11 | 0.698 | 0.0552 | -0.42 | 0.723 | -- | -0.0435 | 22 | 41.99 | 312 | -- | -- |
| 316.07 | 0.828 | 3.06 | 0.836 | 0.164 | -2.98 | -- | 15.1 | -0.0404 | 1.03 | 48.19 | 191 | -- | -- |
| 333.86 | 0.851 | 3.12 | 0.674 | 0.105 | -0.309 | -- | -- | -0.0661 | 22 | 58 | 467 | -- | -- |
| 317.63 | 0.83 | 3.06 | 0.812 | -- | -2.89 | -- | 14.3 | -0.0527 | -- | 48.16 | 191 | -- | -- |
| 333.6 | 0.856 | 3.11 | 0.682 | 0.0739 | -- | 0.746 | -- | -0.0416 | 22.4 | -- | -- | -- | -- |
| 335.22 | 0.857 | 3.11 | 0.648 | 0.126 | -- | -- | -- | -0.0465 | 2.38 | -- | -- | -- | -- |
| 325.22 | 0.84 | 3.13 | 0.434 | -- | 2.19 | -- | -- | -0.0962 | -- | 44 | 63 | -- | -- |
| 343.95 | 0.868 | 3.13 | -- | 0.0184 | -0.208 | -- | -- | -0.119 | 10.4 | 68 | 335 | -- | -- |
| 336.16 | 0.857 | 3.11 | 0.653 | -- | -- | -- | -- | -0.0434 | -- | -- | -- | -- | -- |
| 346.29 | 0.87 | 3.13 | -- | 0.138 | -- | -- | -- | -0.119 | 2.46 | -- | -- | -- | -- |
| 327.28 | 0.843 | 3.12 | -- | -- | 3.68 | -- | -- | -0.0857 | -- | 45 | 146 | -- | -- |
| 347.42 | 0.87 | 3.13 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 305.76 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 2 | 305.78 | humidity | 50.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 3 | 306.24 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 23 | 306.97 | humidity | 50.0 | 90 | < th | dose independent | sin | 13 | NA |
| 25 | 306.98 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 5 |
| 63 | 307.46 | humidity | 50.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 84 | 307.54 | humidity | 50.0 | 90 | > th | dose independent | sin | 13 | NA |
| 87 | 307.64 | humidity | 50.0 | 30 | < th | dose dependent | sin | 13 | NA |
| 95 | 308.38 | humidity | 50.0 | 270 | < th | dose independent | rect. | 11 | 2 |
| 131 | 308.48 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 11 | 2 |
| 261 | 310.93 | humidity | 50.0 | 270 | < th | dose independent | sin | 7 | NA |
| 469 | 313.14 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 471 | 313.14 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 568 | 313.89 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 604 | 314.02 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 623 | 314.12 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 665 | 314.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 22 |
| 669 | 314.64 | temperature | 20.0 | 30 | > th | dose independent | rect. | 17 | 22 |
| 670 | 314.67 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 693 | 314.86 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 696 | 314.90 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 701 | 315.03 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 729 | 315.13 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 735 | 315.25 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 738 | 315.32 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 17 | 8 |
| 760 | 315.67 | humidity | 50.0 | 270 | < th | dose independent | sin | 20 | NA |
| 796 | 315.86 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 801 | 315.91 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 807 | 316.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 21 |
| 814 | 316.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 835 | 316.15 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 861 | 316.21 | humidity | 50.0 | 270 | < th | dose independent | no | NA | NA |