Os10g0486100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450-like protein (CYP86B1).
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Os10g0486100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450-like protein (CYP86B1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.38 | 0.696 | 8.8 | 0.714 | 3 | 3.11 | -4.88 | -6.86 | 0.934 | 2.9 | 9.921 | 307 | 2.92 | 14.8 |
| 239.97 | 0.721 | 8.75 | 1.26 | 3.36 | 3.61 | -0.76 | -- | 1.02 | 2.93 | 11.06 | 377 | 2.92 | 13.8 |
| 240.52 | 0.722 | 8.72 | 1.25 | 2.96 | 3.11 | -- | -1.43 | 1.09 | 2.8 | 10.06 | 335 | 2.61 | 14.7 |
| 240.42 | 0.722 | 8.74 | 1.28 | 3.49 | 3.71 | -- | -- | 1.04 | 2.83 | 10.47 | 370 | 2.9 | 13.9 |
| 352.51 | 0.874 | 8.74 | 1.32 | -- | 1.33 | -- | -0.869 | 1.14 | -- | 4.275 | 1463 | 3.1 | 15.5 |
| 311.07 | 0.827 | 8.66 | 1.76 | 1.08 | -- | -2.31 | -- | 1.34 | 5.24 | -- | -- | -- | -- |
| 324.32 | 0.843 | 8.65 | 1.75 | 1.07 | -- | -- | -- | 1.35 | 5.06 | -- | -- | -- | -- |
| 354.39 | 0.877 | 8.77 | 1.35 | -- | 1.41 | -- | -- | 1.11 | -- | 14.8 | 1397 | 1 | 18.1 |
| 282.34 | 0.783 | 8.77 | -- | 3.54 | 3.93 | -- | -- | 0.876 | 2.89 | 12.47 | 381 | 2.86 | 13.8 |
| 384.1 | 0.916 | 8.67 | 1.79 | -- | -- | -- | -- | 1.38 | -- | -- | -- | -- | -- |
| 405.36 | 0.942 | 8.7 | -- | 1.1 | -- | -- | -- | 1.15 | 5 | -- | -- | -- | -- |
| 382.52 | 0.911 | 8.81 | -- | -- | 1.49 | -- | -- | 0.73 | -- | 7.268 | 47520 | 3.07 | 24 |
| 468.79 | 1.01 | 8.71 | -- | -- | -- | -- | -- | 1.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 221.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 3 | 224.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 8 | 226.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 23 | 227.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 63 | 229.91 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 71 | 230.08 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 96 | 230.91 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 12 |
| 109 | 231.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 123 | 231.32 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 159 | 232.29 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 167 | 232.62 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 228 | 233.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 290 | 234.92 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 326 | 235.83 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 14 |
| 449 | 238.17 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 516 | 239.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 605 | 240.74 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 939 | 245.33 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 949 | 245.43 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 972 | 245.81 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 19 |
| 994 | 246.04 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 1 |