Os10g0484400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L18P/L5E family protein.
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Os10g0484400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L18P/L5E family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.57 | 0.321 | 7.9 | 1.99 | 2.37 | 0.854 | -0.221 | -1.79 | 0.339 | 18.3 | 24.4 | 734 | -- | -- |
| 49.84 | 0.329 | 7.94 | 1.7 | 2.4 | 1.22 | 0.0386 | -- | 0.258 | 18.3 | 22.75 | 613 | -- | -- |
| 46.64 | 0.318 | 7.9 | 2.01 | 2.37 | 0.862 | -- | -1.76 | 0.342 | 18.3 | 24.34 | 801 | -- | -- |
| 49.82 | 0.329 | 7.94 | 1.71 | 2.4 | 1.2 | -- | -- | 0.256 | 18.3 | 22.78 | 614 | -- | -- |
| 317.27 | 0.83 | 7.82 | 2.19 | -- | 1.11 | -- | -2.34 | 0.41 | -- | 28.09 | 1301 | -- | -- |
| 66.85 | 0.383 | 7.98 | 1.41 | 2.32 | -- | 0.0388 | -- | 0.0752 | 18.1 | -- | -- | -- | -- |
| 66.85 | 0.383 | 7.98 | 1.41 | 2.32 | -- | -- | -- | 0.0753 | 18.1 | -- | -- | -- | -- |
| 322.1 | 0.836 | 7.86 | 1.76 | -- | 1.28 | -- | -- | 0.326 | -- | 25.94 | 1321 | -- | -- |
| 117.81 | 0.508 | 8.01 | -- | 2.3 | 0.335 | -- | -- | -0.0475 | 18.1 | 22.78 | 614 | -- | -- |
| 344.78 | 0.868 | 7.94 | 1.34 | -- | -- | -- | -- | 0.0236 | -- | -- | -- | -- | -- |
| 119.25 | 0.511 | 8.02 | -- | 2.3 | -- | -- | -- | -0.0817 | 18.1 | -- | -- | -- | -- |
| 389.26 | 0.919 | 7.95 | -- | -- | 0.437 | -- | -- | -0.0445 | -- | 25.8 | 1279 | -- | -- |
| 392.46 | 0.925 | 7.97 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 2 | 44.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 17 | 45.41 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 30 | 45.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 48 | 45.88 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 62 | 46.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 121 | 46.72 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 143 | 46.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 164 | 47.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 171 | 47.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 22 |
| 191 | 47.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 8 |
| 231 | 47.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 296 | 48.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 308 | 48.13 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 21 |
| 347 | 48.21 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 17 |
| 348 | 48.21 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 22 |
| 372 | 48.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 5 |
| 399 | 48.27 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 20 |
| 547 | 48.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 653 | 48.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 654 | 48.50 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 762 | 48.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 907 | 48.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 991 | 48.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |