Os10g0483500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD linked oxidase, N-terminal domain containing protein.
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Os10g0483500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD linked oxidase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 274.6 | 0.779 | 9.38 | -5.1 | 1.41 | -1.03 | -0.0633 | -0.878 | -2.32 | 7.91 | 8.947 | 38 | -- | -- |
| 277.82 | 0.776 | 9.37 | -5.08 | 1.41 | -1.02 | 0.65 | -- | -2.31 | 7.98 | 8.95 | 38 | -- | -- |
| 274.61 | 0.772 | 9.38 | -5.1 | 1.41 | -1.03 | -- | -0.857 | -2.32 | 7.9 | 8.94 | 38 | -- | -- |
| 278.99 | 0.778 | 9.37 | -5.06 | 1.39 | -1.05 | -- | -- | -2.31 | 7.86 | 8.94 | 38 | -- | -- |
| 362.33 | 0.887 | 9.46 | -5.01 | -- | -1.37 | -- | -0.313 | -2.34 | -- | 6.6 | 38 | -- | -- |
| 305.7 | 0.82 | 9.34 | -5.16 | 2.12 | -- | 0.667 | -- | -2.26 | 9.83 | -- | -- | -- | -- |
| 307.41 | 0.821 | 9.34 | -5.13 | 2.12 | -- | -- | -- | -2.26 | 9.81 | -- | -- | -- | -- |
| 362.81 | 0.887 | 9.43 | -5 | -- | -1.44 | -- | -- | -2.4 | -- | 6.98 | 37 | -- | -- |
| 948.13 | 1.43 | 9.24 | -- | 1.23 | -1.38 | -- | -- | -1.75 | 7.2 | 9.05 | 32 | -- | -- |
| 574.73 | 1.12 | 9.4 | -5.16 | -- | -- | -- | -- | -2.26 | -- | -- | -- | -- | -- |
| 1002.24 | 1.48 | 9.21 | -- | 2.13 | -- | -- | -- | -1.69 | 9.99 | -- | -- | -- | -- |
| 1019.26 | 1.49 | 9.29 | -- | -- | -1.56 | -- | -- | -1.83 | -- | 8.04 | 32 | -- | -- |
| 1276.04 | 1.67 | 9.27 | -- | -- | -- | -- | -- | -1.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 264.64 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 4 | 267.25 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 16 |
| 7 | 268.68 | radiation | 10 | 90 | < th | dose dependent | sin | 23 | NA |
| 31 | 272.31 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 14 |
| 35 | 272.86 | radiation | 10 | 10 | > th | dose independent | sin | 20 | NA |
| 47 | 273.25 | radiation | 10 | 30 | > th | dose independent | rect. | 11 | 23 |
| 54 | 273.52 | radiation | 10 | 30 | < th | dose independent | rect. | 23 | 23 |
| 60 | 273.73 | radiation | 10 | 30 | < th | dose independent | sin | 22 | NA |
| 80 | 274.41 | radiation | 20 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 87 | 274.49 | radiation | 10 | 30 | < th | dose independent | rect. | 5 | 23 |
| 99 | 274.84 | radiation | 20 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 123 | 275.40 | radiation | 20 | 90 | < th | dose dependent | rect. | 11 | 10 |
| 128 | 275.55 | radiation | 10 | 90 | < th | dose independent | rect. | 11 | 23 |
| 132 | 275.61 | radiation | 10 | 30 | < th | dose independent | rect. | 1 | 23 |
| 137 | 275.71 | radiation | 10 | 30 | > th | dose independent | rect. | 17 | 23 |
| 138 | 275.71 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 149 | 275.94 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 155 | 276.04 | radiation | 10 | 90 | < th | dose independent | rect. | 11 | 10 |
| 159 | 276.10 | radiation | 10 | 10 | > th | dose independent | rect. | 8 | 23 |
| 163 | 276.11 | radiation | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 169 | 276.17 | radiation | 10 | 30 | < th | dose independent | rect. | 9 | 23 |
| 170 | 276.18 | radiation | 10 | 30 | < th | dose independent | no | NA | NA |
| 173 | 276.21 | radiation | 10 | 30 | < th | dose independent | rect. | 15 | 23 |
| 174 | 276.22 | radiation | 10 | 30 | < th | dose independent | rect. | 13 | 23 |
| 185 | 276.39 | radiation | 20 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 188 | 276.45 | radiation | 10 | 10 | > th | dose independent | rect. | 9 | 9 |
| 221 | 276.49 | radiation | 20 | 30 | < th | dose dependent | no | NA | NA |
| 224 | 276.51 | radiation | 20 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 232 | 276.56 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 233 | 276.56 | radiation | 20 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 250 | 276.75 | radiation | 10 | 30 | > th | dose independent | no | NA | NA |
| 251 | 276.75 | radiation | 10 | 30 | > th | dose independent | rect. | 6 | 12 |
| 332 | 276.81 | radiation | 20 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 334 | 276.82 | radiation | 20 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 342 | 276.96 | radiation | 10 | 30 | > th | dose independent | rect. | 6 | 10 |
| 353 | 276.96 | radiation | 10 | 90 | < th | dose independent | rect. | 1 | 20 |
| 439 | 277.76 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 6 |
| 689 | 278.61 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 704 | 278.61 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 921 | 279.42 | radiation | 10 | 270 | > th | dose independent | rect. | 11 | 2 |
| 930 | 279.45 | temperature | 10 | 90 | > th | dose dependent | rect. | 21 | 20 |
| 1000 | 279.87 | radiation | 1 | 90 | > th | dose dependent | rect. | 11 | 23 |