Os10g0483000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcription factor homolog BTF3-like protein.
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Os10g0483000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transcription factor homolog BTF3-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.71 | 0.321 | 14.4 | 0.253 | 1.28 | -0.363 | -0.192 | 0.277 | -0.12 | 20.2 | 25.2 | 252 | -- | -- |
| 46.93 | 0.319 | 14.4 | 0.331 | 1.3 | -0.335 | -0.24 | -- | -0.0892 | 20.2 | 25.2 | 254 | -- | -- |
| 46.82 | 0.319 | 14.4 | 0.247 | 1.28 | -0.368 | -- | 0.31 | -0.123 | 20.3 | 25.2 | 253 | -- | -- |
| 47.1 | 0.32 | 14.4 | 0.337 | 1.29 | -0.347 | -- | -- | -0.0926 | 20.2 | 25.3 | 250 | -- | -- |
| 114.15 | 0.498 | 14.3 | 0.367 | -- | -0.846 | -- | 0.0866 | -0.223 | -- | 25.69 | 384 | -- | -- |
| 52.63 | 0.34 | 14.3 | 0.432 | 1.47 | -- | -0.276 | -- | 0.0612 | 19.7 | -- | -- | -- | -- |
| 52.84 | 0.34 | 14.3 | 0.439 | 1.47 | -- | -- | -- | 0.0608 | 19.7 | -- | -- | -- | -- |
| 110.97 | 0.491 | 14.3 | 0.199 | -- | -1.04 | -- | -- | -0.282 | -- | 25.9 | 498 | -- | -- |
| 50.01 | 0.329 | 14.4 | -- | 1.28 | -0.397 | -- | -- | -0.141 | 20.3 | 25.3 | 243 | -- | -- |
| 169.68 | 0.609 | 14.3 | 0.42 | -- | -- | -- | -- | 0.0396 | -- | -- | -- | -- | -- |
| 57.91 | 0.356 | 14.3 | -- | 1.47 | -- | -- | -- | 0.012 | 19.7 | -- | -- | -- | -- |
| 111 | 0.491 | 14.4 | -- | -- | -1.05 | -- | -- | -0.286 | -- | 25.88 | 510 | -- | -- |
| 174.33 | 0.616 | 14.3 | -- | -- | -- | -- | -- | -0.00697 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.37 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 2 | 38.44 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 10 | 39.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 22 | 40.44 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 27 | 40.49 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 125 | 41.87 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 126 | 41.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 132 | 41.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 146 | 42.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 152 | 42.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 157 | 42.15 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 162 | 42.19 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 179 | 42.26 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 186 | 42.32 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 198 | 42.38 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 230 | 42.46 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 232 | 42.47 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 235 | 42.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 4 |
| 236 | 42.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 242 | 42.50 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 247 | 42.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 256 | 42.56 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 257 | 42.56 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 261 | 42.57 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 263 | 42.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 265 | 42.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 266 | 42.57 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 268 | 42.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 269 | 42.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 270 | 42.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 290 | 42.64 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 292 | 42.64 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 293 | 42.64 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 295 | 42.64 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 296 | 42.64 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 297 | 42.64 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 303 | 42.66 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 308 | 42.68 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 310 | 42.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 313 | 42.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 323 | 42.74 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 354 | 42.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 355 | 42.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 357 | 42.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 360 | 42.89 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 368 | 42.91 | wind | 7.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 388 | 42.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 390 | 42.96 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 400 | 42.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 403 | 42.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 404 | 42.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 407 | 42.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 419 | 42.98 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 427 | 43.01 | temperature | 20.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 432 | 43.03 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 456 | 43.08 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 479 | 43.12 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 484 | 43.13 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 486 | 43.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 490 | 43.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 507 | 43.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 529 | 43.23 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 539 | 43.24 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 554 | 43.29 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 563 | 43.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 565 | 43.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 569 | 43.33 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 580 | 43.35 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 633 | 43.46 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 647 | 43.48 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 651 | 43.49 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 653 | 43.49 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 668 | 43.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 670 | 43.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 671 | 43.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 674 | 43.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 675 | 43.52 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 677 | 43.52 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 682 | 43.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 709 | 43.55 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 729 | 43.58 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 730 | 43.59 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 11 |
| 739 | 43.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 740 | 43.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 744 | 43.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 752 | 43.63 | temperature | 30.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 781 | 43.67 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 782 | 43.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 855 | 43.75 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 18 | 14 |
| 859 | 43.76 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 908 | 43.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 922 | 43.85 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 939 | 43.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 941 | 43.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 942 | 43.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 944 | 43.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 945 | 43.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 946 | 43.88 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 975 | 43.93 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 17 |