Os10g0481400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0481400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.05 | 0.21 | 9.73 | 0.107 | 1.03 | 0.621 | 0.542 | -5.56 | -0.262 | 7.08 | 29.77 | 4089 | -- | -- |
| 22.45 | 0.222 | 9.85 | -0.887 | 1.03 | 0.114 | 0.499 | -- | -0.369 | 7.2 | 29.77 | 4089 | -- | -- |
| 20.82 | 0.212 | 9.73 | 0.111 | 1.03 | 0.618 | -- | -5.55 | -0.264 | 7.06 | 29.76 | 4063 | -- | -- |
| 22.84 | 0.224 | 9.85 | -0.865 | 1.02 | 0.123 | -- | -- | -0.358 | 7.3 | 28.8 | 25330 | -- | -- |
| 72.15 | 0.396 | 9.74 | 0.347 | -- | 0.83 | -- | -5.02 | -0.0319 | -- | 29.1 | 2116 | -- | -- |
| 22.89 | 0.224 | 9.85 | -0.903 | 1.05 | -- | 0.532 | -- | -0.366 | 7.07 | -- | -- | -- | -- |
| 23.63 | 0.228 | 9.85 | -0.893 | 1.05 | -- | -- | -- | -0.368 | 7.06 | -- | -- | -- | -- |
| 73.7 | 0.402 | 9.85 | -0.816 | -- | 0.282 | -- | -- | -0.232 | -- | 25.58 | 3629 | -- | -- |
| 23.33 | 0.225 | 9.8 | -- | 1.04 | 0.839 | -- | -- | -0.0906 | 7.05 | 17.52 | 47520 | -- | -- |
| 81.61 | 0.422 | 9.88 | -0.872 | -- | -- | -- | -- | -0.349 | -- | -- | -- | -- | -- |
| 44.65 | 0.313 | 9.83 | -- | 1.04 | -- | -- | -- | -0.268 | 7.12 | -- | -- | -- | -- |
| 81.11 | 0.419 | 9.82 | -- | -- | 0.763 | -- | -- | -0.093 | -- | 17.43 | 47520 | -- | -- |
| 101.69 | 0.471 | 9.85 | -- | -- | -- | -- | -- | -0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 13 | 19.15 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 20 | 19.31 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 23 | 19.33 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 32 | 19.40 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 37 | 19.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 39 | 19.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 44 | 19.48 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 45 | 19.49 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 47 | 19.49 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 19 |
| 49 | 19.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 55 | 19.53 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 56 | 19.54 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 58 | 19.55 | wind | 1 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 66 | 19.57 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 68 | 19.57 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 85 | 19.62 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 6 |
| 87 | 19.62 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 113 | 19.68 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 133 | 19.72 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 8 |
| 139 | 19.73 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 143 | 19.74 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 173 | 19.77 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 216 | 19.81 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 224 | 19.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 226 | 19.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 242 | 19.84 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 278 | 19.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 285 | 19.88 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 286 | 19.88 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 3 |
| 288 | 19.88 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 298 | 19.88 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 344 | 19.92 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 346 | 19.92 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 350 | 19.92 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 9 |
| 355 | 19.93 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 356 | 19.93 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 375 | 19.94 | wind | 3 | 14400 | < th | dose dependent | sin | 10 | NA |
| 390 | 19.95 | wind | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 424 | 19.97 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 519 | 20.02 | wind | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 538 | 20.03 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 1 |
| 544 | 20.03 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 630 | 20.06 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 663 | 20.07 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 677 | 20.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 714 | 20.09 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 749 | 20.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 774 | 20.11 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 802 | 20.12 | wind | 5 | 270 | < th | dose independent | rect. | 3 | 2 |
| 909 | 20.15 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 11 |
| 914 | 20.15 | wind | 1 | 14400 | > th | dose dependent | sin | 9 | NA |
| 917 | 20.15 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 921 | 20.15 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 945 | 20.16 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 15 |