Os10g0481200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0481200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.38 | 0.757 | 3.95 | -0.855 | 0.338 | -1.51 | -1.04 | -1.78 | -0.254 | 10.7 | 80.61 | 7219 | -- | -- |
| 264.25 | 0.757 | 3.95 | -0.632 | 0.346 | -1.62 | -0.991 | -- | -0.156 | 10.9 | 80.64 | 7245 | -- | -- |
| 263.38 | 0.756 | 3.94 | -0.906 | 0.354 | -1.49 | -- | -1.71 | -0.252 | 10.5 | 82 | 7262 | -- | -- |
| 267.97 | 0.762 | 3.96 | -0.699 | 0.358 | -1.61 | -- | -- | -0.158 | 10.6 | 81.24 | 7260 | -- | -- |
| 270.53 | 0.766 | 3.95 | -0.908 | -- | -1.54 | -- | -1.7 | -0.245 | -- | 82 | 7117 | -- | -- |
| 308.05 | 0.823 | 4.1 | -0.44 | 0.342 | -- | -0.937 | -- | -0.79 | 10.6 | -- | -- | -- | -- |
| 311.66 | 0.827 | 4.1 | -0.479 | 0.348 | -- | -- | -- | -0.793 | 10.4 | -- | -- | -- | -- |
| 273.19 | 0.77 | 3.96 | -0.688 | -- | -1.81 | -- | -- | -0.125 | -- | 81.7 | 6800 | -- | -- |
| 279.91 | 0.779 | 3.95 | -- | 0.357 | -1.47 | -- | -- | -0.144 | 10.7 | 80.01 | 7250 | -- | -- |
| 319.08 | 0.835 | 4.11 | -0.485 | -- | -- | -- | -- | -0.794 | -- | -- | -- | -- | -- |
| 317.71 | 0.834 | 4.09 | -- | 0.351 | -- | -- | -- | -0.74 | 10.5 | -- | -- | -- | -- |
| 284.59 | 0.786 | 3.95 | -- | -- | -1.68 | -- | -- | -0.101 | -- | 80.62 | 6745 | -- | -- |
| 325.27 | 0.842 | 4.09 | -- | -- | -- | -- | -- | -0.74 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 256.60 | humidity | 60 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 7 | 259.26 | humidity | 70 | 4320 | > th | dose dependent | rect. | 13 | 7 |
| 14 | 260.28 | humidity | 70 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 23 | 260.79 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 37 | 261.24 | humidity | 70 | 4320 | > th | dose dependent | rect. | 5 | 17 |
| 41 | 261.38 | humidity | 70 | 4320 | > th | dose dependent | sin | 20 | NA |
| 44 | 261.46 | humidity | 70 | 4320 | > th | dose dependent | rect. | 9 | 13 |
| 52 | 261.64 | humidity | 90 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 96 | 262.21 | humidity | 90 | 4320 | > th | dose independent | rect. | 5 | 17 |
| 116 | 262.47 | humidity | 80 | 4320 | < th | dose independent | rect. | 13 | 8 |
| 144 | 262.73 | humidity | 90 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 176 | 262.96 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 21 |
| 192 | 263.15 | humidity | 80 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 300 | 263.80 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 386 | 264.17 | humidity | 90 | 4320 | > th | dose independent | rect. | 16 | 5 |
| 389 | 264.17 | humidity | 60 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 410 | 264.27 | humidity | 60 | 4320 | > th | dose dependent | no | NA | NA |
| 467 | 264.53 | humidity | 80 | 4320 | < th | dose independent | sin | 19 | NA |
| 549 | 264.86 | humidity | 90 | 4320 | < th | dose dependent | rect. | 13 | 18 |
| 563 | 264.96 | humidity | 90 | 4320 | < th | dose dependent | rect. | 13 | 13 |
| 574 | 265.06 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 581 | 265.13 | humidity | 80 | 4320 | > th | dose independent | sin | 19 | NA |
| 593 | 265.18 | humidity | 90 | 4320 | < th | dose independent | rect. | 5 | 16 |
| 636 | 265.37 | humidity | 80 | 4320 | < th | dose independent | rect. | 10 | 11 |
| 686 | 265.54 | humidity | 90 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 688 | 265.54 | humidity | 90 | 4320 | < th | dose dependent | rect. | 13 | 8 |
| 711 | 265.64 | humidity | 80 | 4320 | < th | dose independent | rect. | 8 | 13 |
| 726 | 265.70 | humidity | 80 | 4320 | < th | dose independent | rect. | 10 | 14 |
| 766 | 265.84 | humidity | 80 | 4320 | < th | dose independent | rect. | 8 | 16 |
| 776 | 265.88 | humidity | 80 | 4320 | < th | dose independent | rect. | 13 | 20 |
| 794 | 265.94 | humidity | 80 | 4320 | > th | dose independent | rect. | 13 | 22 |
| 810 | 265.98 | humidity | 80 | 4320 | < th | dose independent | rect. | 13 | 22 |
| 841 | 266.09 | humidity | 80 | 4320 | > th | dose independent | rect. | 10 | 12 |
| 884 | 266.23 | humidity | 90 | 4320 | > th | dose independent | sin | 23 | NA |
| 933 | 266.36 | humidity | 80 | 4320 | > th | dose independent | rect. | 13 | 20 |