Os10g0481100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arabidopsis thaliana (Fragment).
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Os10g0481100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arabidopsis thaliana (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.92 | 0.797 | 3.12 | 0.127 | 0.335 | 6.98 | -0.526 | 14.8 | -0.118 | 14.1 | 10.2 | 94 | -- | -- |
| 300.72 | 0.808 | 3.09 | 0.16 | 0.267 | 5.29 | -1.39 | -- | -0.0988 | 13.3 | 10.28 | 66 | -- | -- |
| 288.85 | 0.792 | 3.12 | 0.107 | 0.331 | 6.66 | -- | 13.3 | -0.117 | 14.6 | 10.2 | 103 | -- | -- |
| 291.41 | 0.795 | 3.08 | 0.0239 | 0.352 | 3.39 | -- | -- | -0.0979 | 13.7 | 10.26 | 70 | -- | -- |
| 295.31 | 0.8 | 3.12 | 0.114 | -- | 6.61 | -- | 12.3 | -0.12 | -- | 10.16 | 103 | -- | -- |
| 314.25 | 0.831 | 3.09 | -0.0814 | 0.399 | -- | -0.689 | -- | -0.153 | 14.7 | -- | -- | -- | -- |
| 315.88 | 0.832 | 3.1 | -0.0983 | 0.4 | -- | -- | -- | -0.157 | 14.9 | -- | -- | -- | -- |
| 296.8 | 0.802 | 3.09 | 0.0292 | -- | 3.73 | -- | -- | -0.115 | -- | 10.2 | 69 | -- | -- |
| 290.85 | 0.794 | 3.1 | -- | 0.341 | 3.54 | -- | -- | -0.124 | 14.6 | 10.22 | 70 | -- | -- |
| 325.1 | 0.843 | 3.1 | -0.115 | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
| 316.14 | 0.832 | 3.09 | -- | 0.402 | -- | -- | -- | -0.146 | 14.9 | -- | -- | -- | -- |
| 296.82 | 0.802 | 3.09 | -- | -- | 3.71 | -- | -- | -0.119 | -- | 10.2 | 68 | -- | -- |
| 325.45 | 0.842 | 3.09 | -- | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 285.68 | wind | 9 | 90 | > th | dose dependent | rect. | 15 | 2 |
| 3 | 286.16 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 4 |
| 7 | 286.65 | wind | 9 | 270 | > th | dose independent | rect. | 14 | 2 |
| 8 | 286.72 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 5 |
| 31 | 287.86 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 9 |
| 65 | 289.15 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 9 |
| 201 | 292.95 | wind | 9 | 90 | > th | dose dependent | sin | 16 | NA |
| 306 | 294.64 | humidity | 80 | 30 | < th | dose independent | rect. | 23 | 1 |
| 309 | 294.64 | humidity | 80 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 323 | 295.16 | wind | 9 | 90 | > th | dose independent | sin | 15 | NA |
| 327 | 295.26 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 335 | 295.26 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 401 | 296.44 | wind | 9 | 90 | < th | dose independent | sin | 16 | NA |
| 606 | 298.86 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 20 |
| 679 | 299.19 | wind | 5 | 10 | > th | dose independent | rect. | 23 | 1 |
| 721 | 299.40 | wind | 5 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 755 | 299.54 | wind | 9 | 90 | > th | dose dependent | no | NA | NA |
| 804 | 299.62 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 4 |
| 839 | 299.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 843 | 299.90 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 928 | 300.11 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 930 | 300.12 | temperature | 20 | 4320 | < th | dose dependent | sin | 14 | NA |