Os10g0478900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0478900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.37 | 0.241 | 9.72 | 0.46 | 0.131 | 0.604 | -0.265 | -0.174 | 0.0879 | 4.09 | 25.36 | 3703 | -- | -- |
| 26.4 | 0.239 | 9.71 | 0.505 | 0.138 | 0.599 | -0.268 | -- | 0.0994 | 4.03 | 25.4 | 3682 | -- | -- |
| 26.56 | 0.24 | 9.72 | 0.459 | 0.131 | 0.606 | -- | -0.195 | 0.0878 | 3.79 | 25.33 | 3682 | -- | -- |
| 26.59 | 0.24 | 9.71 | 0.511 | 0.131 | 0.594 | -- | -- | 0.103 | 3.76 | 25.37 | 3682 | -- | -- |
| 27.39 | 0.244 | 9.72 | 0.443 | -- | 0.616 | -- | -0.244 | 0.0904 | -- | 25.35 | 3828 | -- | -- |
| 35.39 | 0.279 | 9.68 | 0.722 | 0.175 | -- | -0.17 | -- | 0.233 | 2.35 | -- | -- | -- | -- |
| 35.48 | 0.279 | 9.68 | 0.727 | 0.174 | -- | -- | -- | 0.234 | 2.08 | -- | -- | -- | -- |
| 27.42 | 0.244 | 9.71 | 0.516 | -- | 0.593 | -- | -- | 0.112 | -- | 25.6 | 3828 | -- | -- |
| 27.7 | 0.245 | 9.76 | -- | 0.153 | 0.691 | -- | -- | -0.109 | 2.62 | 23.5 | 42643 | -- | -- |
| 37.3 | 0.285 | 9.68 | 0.734 | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
| 49.42 | 0.329 | 9.7 | -- | 0.188 | -- | -- | -- | 0.153 | 2.17 | -- | -- | -- | -- |
| 29.02 | 0.251 | 9.76 | -- | -- | 0.699 | -- | -- | -0.108 | -- | 23.4 | 42763 | -- | -- |
| 51.53 | 0.335 | 9.7 | -- | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.48 | temperature | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 26.48 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 5 | 26.52 | temperature | 25 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 14 | 26.56 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 25 | 26.58 | temperature | 15 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 28 | 26.59 | temperature | 15 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 66 | 26.61 | temperature | 30 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 100 | 26.63 | temperature | 25 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 139 | 26.65 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 20 |
| 202 | 26.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 20 |
| 289 | 26.73 | temperature | 25 | 4320 | > th | dose independent | sin | 15 | NA |
| 299 | 26.73 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 8 |
| 376 | 26.78 | temperature | 15 | 14400 | > th | dose dependent | sin | 8 | NA |
| 385 | 26.79 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 412 | 26.80 | temperature | 30 | 14400 | < th | dose dependent | sin | 8 | NA |
| 425 | 26.81 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 431 | 26.81 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 487 | 26.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 512 | 26.85 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 534 | 26.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 537 | 26.86 | temperature | 10 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 539 | 26.86 | temperature | 30 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 581 | 26.88 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 586 | 26.88 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 640 | 26.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 22 |
| 656 | 26.91 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 695 | 26.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 697 | 26.92 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 701 | 26.92 | temperature | 25 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 729 | 26.93 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 20 |
| 759 | 26.94 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 770 | 26.94 | humidity | 80 | 43200 | > th | dose dependent | sin | 18 | NA |
| 809 | 26.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 13 | 21 |
| 810 | 26.95 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 856 | 26.96 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 919 | 26.97 | temperature | 25 | 43200 | < th | dose dependent | sin | 17 | NA |