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Os10g0477600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NAM / CUC2-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.13 (0.0355) R2 : 0.471
β1 : -1.18 (0.135) R2dD : 0.103 R2D : 0.0533
β2 : 1.29 (0.0905) R2dC : 0.237 R2C : 0.242
β3 : 1.02 (0.12) R2dE : 0.103 R2E : 0.0779
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.322 (0.0793) R2dN8 : 0.029 R2N8 : 0.0696
σ : 0.652
deviance : 195.91
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C
peak time of C : 6.96
E
wheather : temperature
threshold : 19.89
memory length : 1307
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
194.99 0.656 7.16 -1.47 1.29 1.05 -0.152 -1.06 0.241 6.96 20.95 1321 -- --
196.18 0.652 7.15 -1.22 1.33 1.12 -0.089 -- 0.273 6.98 19.09 1292 -- --
195.05 0.65 7.16 -1.48 1.29 1.05 -- -1.05 0.242 6.95 20.94 1327 -- --
195.91 0.652 7.13 -1.18 1.29 1.02 -- -- 0.322 6.96 19.89 1307 -- --
282.03 0.782 7.19 -1.45 -- 1.09 -- -0.957 0.258 -- 21.1 1355 -- --
226.38 0.705 7.07 -0.817 1.33 -- -0.0929 -- 0.554 6.62 -- -- -- --
226.4 0.705 7.07 -0.818 1.33 -- -- -- 0.554 6.62 -- -- -- --
282.68 0.783 7.16 -1.17 -- 1.04 -- -- 0.335 -- 20.6 1356 -- --
229.24 0.705 7.09 -- 1.36 0.79 -- -- 0.452 6.83 21.4 1328 -- --
318.3 0.834 7.1 -0.787 -- -- -- -- 0.581 -- -- -- -- --
244.05 0.731 7.05 -- 1.32 -- -- -- 0.645 6.66 -- -- -- --
314.44 0.826 7.11 -- -- 0.718 -- -- 0.533 -- 21.9 1342 -- --
334.62 0.854 7.08 -- -- -- -- -- 0.668 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 187.34 temperature 10 270 > th dose dependent rect. 14 19
2 187.98 temperature 20 1440 > th dose dependent rect. 16 2
3 188.10 radiation 40 90 < th dose independent rect. 3 8
7 188.30 temperature 10 1440 > th dose dependent rect. 17 1
23 189.24 temperature 10 270 > th dose dependent rect. 13 21
28 189.33 temperature 10 270 > th dose dependent rect. 1 8
86 190.45 wind 9 43200 > th dose dependent rect. 18 12
87 190.47 radiation 40 270 < th dose independent rect. 1 9
99 190.77 temperature 20 270 > th dose independent rect. 2 7
107 190.87 wind 9 43200 > th dose independent rect. 18 12
131 191.15 radiation 40 90 < th dose independent rect. 3 18
144 191.31 temperature 20 270 > th dose independent rect. 3 17
151 191.45 wind 9 43200 < th dose independent rect. 18 4
157 191.49 wind 9 43200 < th dose independent rect. 18 12
163 191.56 temperature 10 10 > th dose dependent rect. 4 18
192 191.91 temperature 20 10 > th dose dependent rect. 16 18
193 191.92 temperature 30 1440 < th dose dependent rect. 16 2
205 192.04 wind 9 43200 > th dose independent rect. 18 7
206 192.05 temperature 10 270 > th dose dependent rect. 3 17
212 192.08 temperature 30 1440 < th dose dependent rect. 14 6
216 192.12 temperature 30 1440 < th dose dependent rect. 13 9
218 192.14 temperature 20 1440 > th dose dependent sin 17 NA
227 192.19 temperature 20 30 > th dose independent rect. 4 18
236 192.26 wind 5 43200 > th dose dependent rect. 13 19
275 192.49 wind 7 43200 < th dose independent rect. 14 20
292 192.59 wind 7 43200 > th dose independent rect. 14 20
312 192.67 humidity 70 720 < th dose independent rect. 18 14
326 192.74 temperature 10 270 > th dose dependent rect. 14 8
350 192.87 wind 9 43200 > th dose dependent rect. 18 8
360 192.92 humidity 70 720 < th dose independent rect. 18 2
399 193.02 wind 5 43200 > th dose independent rect. 11 19
425 193.12 humidity 70 720 > th dose independent rect. 18 9
426 193.12 wind 5 43200 > th dose dependent sin 15 NA
428 193.14 humidity 70 720 < th dose dependent rect. 18 14
475 193.32 humidity 70 720 < th dose dependent rect. 18 2
495 193.34 radiation 30 14400 < th dose independent rect. 16 1
538 193.49 wind 5 43200 < th dose independent rect. 11 20
568 193.57 humidity 70 720 > th dose independent rect. 17 14
581 193.58 wind 5 43200 > th dose dependent rect. 22 23
591 193.60 wind 5 43200 > th dose dependent rect. 6 19
625 193.68 radiation 10 14400 > th dose independent rect. 5 1
663 193.75 radiation 30 14400 < th dose independent rect. 16 13
664 193.75 wind 9 43200 > th dose dependent sin 14 NA
668 193.76 humidity 60 90 > th dose independent rect. 3 8
697 193.81 radiation 40 270 < th dose independent rect. 3 16
704 193.82 wind 9 43200 > th dose independent sin 13 NA
723 193.85 wind 5 43200 > th dose dependent rect. 4 17
724 193.85 wind 5 43200 > th dose dependent rect. 2 19
737 193.87 wind 5 43200 > th dose dependent rect. 6 15
760 193.90 wind 7 43200 < th dose independent sin 14 NA
767 193.91 wind 5 43200 > th dose dependent no NA NA
805 193.97 wind 5 43200 > th dose independent sin 15 NA
846 194.04 wind 5 43200 > th dose dependent rect. 20 23
858 194.06 wind 5 43200 > th dose dependent rect. 18 23
874 194.10 wind 5 43200 > th dose independent rect. 22 23
890 194.13 wind 7 43200 < th dose independent rect. 22 23
937 194.20 radiation 30 14400 < th dose independent rect. 16 5
986 194.27 wind 7 43200 < th dose independent rect. 5 22