Os10g0477200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os10g0477200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.9 | 0.376 | 8.25 | 1.3 | 0.661 | -0.444 | -0.149 | 3.54 | -0.334 | 18 | 20.55 | 1710 | -- | -- |
| 70.66 | 0.391 | 8.35 | 0.683 | 0.642 | -0.556 | -0.0644 | -- | -0.463 | 18.1 | 12.28 | 23940 | -- | -- |
| 63.94 | 0.372 | 8.25 | 1.29 | 0.655 | -0.439 | -- | 3.48 | -0.337 | 18 | 20.63 | 1649 | -- | -- |
| 70.55 | 0.391 | 8.34 | 0.706 | 0.626 | -0.606 | -- | -- | -0.454 | 18.1 | 7.244 | 23836 | -- | -- |
| 83.96 | 0.427 | 8.24 | 1.25 | -- | -0.544 | -- | 3.31 | -0.348 | -- | 21.41 | 1297 | -- | -- |
| 76.17 | 0.409 | 8.39 | 0.175 | 0.629 | -- | -0.0512 | -- | -0.68 | 18 | -- | -- | -- | -- |
| 76.18 | 0.409 | 8.39 | 0.175 | 0.629 | -- | -- | -- | -0.68 | 17.9 | -- | -- | -- | -- |
| 90.51 | 0.443 | 8.33 | 0.713 | -- | -0.622 | -- | -- | -0.46 | -- | -2.684 | 24340 | -- | -- |
| 75.58 | 0.405 | 8.38 | -- | 0.621 | -0.237 | -- | -- | -0.642 | 18 | 7.226 | 10242 | -- | -- |
| 96.67 | 0.459 | 8.38 | 0.156 | -- | -- | -- | -- | -0.695 | -- | -- | -- | -- | -- |
| 76.98 | 0.41 | 8.39 | -- | 0.626 | -- | -- | -- | -0.7 | 18 | -- | -- | -- | -- |
| 95.36 | 0.455 | 8.37 | -- | -- | -0.276 | -- | -- | -0.643 | -- | 7.923 | 9989 | -- | -- |
| 97.31 | 0.46 | 8.38 | -- | -- | -- | -- | -- | -0.712 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 4 | 60.32 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 5 | 60.44 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 32 | 61.52 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 64 | 61.82 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 65 | 61.82 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 85 | 61.95 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 102 | 62.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 110 | 62.06 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 112 | 62.07 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 131 | 62.11 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 143 | 62.13 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 2 | NA |
| 157 | 62.15 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 172 | 62.18 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 178 | 62.18 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 357 | 62.35 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 361 | 62.35 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 425 | 62.40 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 532 | 62.46 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 533 | 62.46 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 2 | NA |
| 616 | 62.50 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 619 | 62.50 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 736 | 62.57 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 800 | 62.60 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 910 | 62.65 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 8 | 6 |