Os10g0477100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-like protein.
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Os10g0477100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ankyrin-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.94 | 0.318 | 10.2 | -0.817 | 0.763 | 0.179 | -0.62 | -1.76 | -0.387 | 21.4 | 4.67 | 231 | -- | -- |
| 52.24 | 0.339 | 10.2 | -0.807 | 0.489 | -0.479 | -1.49 | -- | -0.377 | 16.1 | 4.67 | 231 | -- | -- |
| 46.7 | 0.318 | 10.2 | -0.79 | 0.765 | 0.168 | -- | -1.47 | -0.383 | 21.3 | 4.674 | 246 | -- | -- |
| 55.88 | 0.35 | 10.2 | -0.817 | 0.565 | -0.225 | -- | -- | -0.392 | 19.1 | 5.7 | 398 | -- | -- |
| 59.94 | 0.361 | 10.2 | -0.932 | -- | 0.82 | -- | -0.521 | -0.384 | -- | 1.095 | 893 | -- | -- |
| 56.85 | 0.353 | 10.2 | -0.794 | 0.685 | -- | 0.536 | -- | -0.387 | 20.8 | -- | -- | -- | -- |
| 57.54 | 0.355 | 10.2 | -0.809 | 0.694 | -- | -- | -- | -0.385 | 20.4 | -- | -- | -- | -- |
| 57.14 | 0.352 | 10.2 | -0.901 | -- | 1.01 | -- | -- | -0.432 | -- | 1.32 | 1004 | -- | -- |
| 71.23 | 0.395 | 10.2 | -- | 0.724 | 0.803 | -- | -- | -0.279 | 20.5 | 59.93 | 533 | -- | -- |
| 84.37 | 0.429 | 10.2 | -0.813 | -- | -- | -- | -- | -0.392 | -- | -- | -- | -- | -- |
| 74.78 | 0.405 | 10.2 | -- | 0.698 | -- | -- | -- | -0.295 | 20.3 | -- | -- | -- | -- |
| 77.79 | 0.411 | 10.2 | -- | -- | 0.95 | -- | -- | -0.393 | -- | 6.383 | 983 | -- | -- |
| 101.79 | 0.471 | 10.1 | -- | -- | -- | -- | -- | -0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 14 | 42.26 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 24 | 42.76 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 7 |
| 32 | 42.96 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 33 | 43.03 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 37 | 43.11 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 39 | 43.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 44 | 43.20 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 55 | 43.41 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 17 |
| 95 | 43.80 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 15 |
| 133 | 44.20 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 137 | 44.24 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 145 | 44.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 171 | 44.41 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 174 | 44.43 | temperature | 15.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 180 | 44.46 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 11 |
| 181 | 44.46 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 202 | 44.51 | radiation | 1.0 | 270 | > th | dose independent | sin | 21 | NA |
| 212 | 44.55 | radiation | 20.0 | 30 | < th | dose independent | rect. | 13 | 17 |
| 219 | 44.60 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 10 |
| 231 | 44.64 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 10 |
| 235 | 44.65 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 3 |
| 259 | 44.71 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 261 | 44.73 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 10 |
| 263 | 44.73 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 269 | 44.75 | radiation | 20.0 | 10 | < th | dose independent | rect. | 16 | 14 |
| 272 | 44.77 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 278 | 44.78 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 281 | 44.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 10 |
| 283 | 44.79 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 284 | 44.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 297 | 44.83 | wind | 9.0 | 270 | < th | dose independent | sin | 21 | NA |
| 310 | 44.87 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 22 |
| 312 | 44.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 317 | 44.89 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 331 | 44.95 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 332 | 44.96 | temperature | 25.0 | 30 | > th | dose independent | sin | 3 | NA |
| 336 | 44.97 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 14 |
| 366 | 45.02 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 382 | 45.08 | temperature | 30.0 | 720 | < th | dose independent | sin | 12 | NA |
| 394 | 45.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 395 | 45.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 403 | 45.13 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 14 |
| 405 | 45.13 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 421 | 45.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 446 | 45.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 449 | 45.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 452 | 45.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 472 | 45.27 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 12 |
| 494 | 45.29 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 528 | 45.33 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 537 | 45.35 | wind | 1.0 | 30 | > th | dose independent | sin | 3 | NA |
| 595 | 45.42 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 601 | 45.44 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 610 | 45.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 614 | 45.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 616 | 45.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 630 | 45.49 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 633 | 45.49 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 641 | 45.49 | wind | 9.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 642 | 45.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 646 | 45.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 664 | 45.51 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 735 | 45.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 767 | 45.64 | temperature | 25.0 | 30 | < th | dose independent | sin | 6 | NA |
| 793 | 45.66 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 10 |
| 806 | 45.67 | radiation | 1.0 | 270 | > th | dose independent | sin | 6 | NA |
| 832 | 45.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 841 | 45.70 | humidity | 90.0 | 10 | < th | dose independent | sin | 2 | NA |
| 859 | 45.71 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 868 | 45.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 923 | 45.77 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 939 | 45.79 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 967 | 45.81 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 973 | 45.81 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 978 | 45.82 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 983 | 45.82 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 5 | 3 |