Os10g0476300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity kinase 1.
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Os10g0476300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual specificity kinase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.5 | 0.526 | 6.05 | 1.04 | 0.227 | -3.28 | 0.947 | 2.76 | 0.318 | 19.5 | 19.4 | 318 | -- | -- |
| 130.21 | 0.531 | 6.11 | 0.55 | 0.223 | -3.21 | 1.52 | -- | 0.175 | 19 | 18.85 | 333 | -- | -- |
| 127.54 | 0.526 | 6.04 | 1.06 | 0.258 | -3.28 | -- | 3.14 | 0.325 | 19.4 | 19.62 | 333 | -- | -- |
| 135.77 | 0.543 | 6.11 | 0.512 | 0.24 | -3.18 | -- | -- | 0.177 | 20.3 | 18.6 | 353 | -- | -- |
| 129.6 | 0.53 | 6.04 | 1.05 | -- | -3.13 | -- | 3.21 | 0.305 | -- | 19.52 | 285 | -- | -- |
| 295.89 | 0.806 | 6.21 | -0.25 | 0.986 | -- | -0.339 | -- | -0.379 | 4.76 | -- | -- | -- | -- |
| 296.18 | 0.806 | 6.21 | -0.248 | 0.983 | -- | -- | -- | -0.378 | 4.71 | -- | -- | -- | -- |
| 137.51 | 0.546 | 6.11 | 0.505 | -- | -3.07 | -- | -- | 0.151 | -- | 18.5 | 300 | -- | -- |
| 141.97 | 0.555 | 6.13 | -- | 0.202 | -2.93 | -- | -- | 0.0743 | 21.4 | 19.09 | 352 | -- | -- |
| 347.43 | 0.871 | 6.22 | -0.211 | -- | -- | -- | -- | -0.352 | -- | -- | -- | -- | -- |
| 297.81 | 0.807 | 6.21 | -- | 0.978 | -- | -- | -- | -0.35 | 4.71 | -- | -- | -- | -- |
| 142.82 | 0.557 | 6.13 | -- | -- | -2.89 | -- | -- | 0.0702 | -- | 19.03 | 278 | -- | -- |
| 348.6 | 0.871 | 6.22 | -- | -- | -- | -- | -- | -0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 2 | 115.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 11 | 116.72 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 24 | 120.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 43 | 121.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 51 | 122.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 55 | 122.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 168 | 125.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 195 | 126.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 200 | 126.73 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 202 | 126.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 213 | 127.02 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 235 | 127.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 239 | 127.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 241 | 127.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 248 | 127.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 256 | 127.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 265 | 127.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 270 | 127.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 308 | 128.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 349 | 128.68 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 420 | 129.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 679 | 130.48 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |