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Os10g0476000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Adaptin ear-binding coat-associated protein 1 NECAP-1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0166) R2 : 0.721
β1 : 0.826 (0.0607) R2dD : 0.118 R2D : 0.0814
β2 : 1.36 (0.0433) R2dC : 0.609 R2C : 0.58
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.272 (0.0354) R2dN8 : 0.0483 R2N8 : 0.00222
σ : 0.312
deviance : 44.36
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.56 0.299 10.6 0.923 1.22 0.377 0.229 -0.0633 0.276 18.4 4.9 106 -- --
40.57 0.297 10.6 0.925 1.22 0.383 0.212 -- 0.275 18.4 4.892 106 -- --
40.68 0.297 10.6 0.919 1.22 0.374 -- 0.0181 0.274 18.4 4.8 109 -- --
40.67 0.297 10.6 0.922 1.22 0.374 -- -- 0.273 18.4 4.8 102 -- --
85.84 0.432 10.5 1.11 -- 0.954 -- -0.0661 0.24 -- 3.315 229 -- --
44.36 0.312 10.6 0.826 1.36 -- -0.000877 -- 0.272 18.1 -- -- -- --
44.36 0.312 10.6 0.826 1.36 -- -- -- 0.272 18.1 -- -- -- --
85.33 0.43 10.5 1.11 -- 1.02 -- -- 0.247 -- 3.616 261 -- --
61.64 0.366 10.6 -- 1.3 0.142 -- -- 0.187 18.2 4.8 114 -- --
140.57 0.554 10.5 0.787 -- -- -- -- 0.241 -- -- -- -- --
62.34 0.369 10.6 -- 1.35 -- -- -- 0.18 18.1 -- -- -- --
116.05 0.502 10.6 -- -- 0.836 -- -- 0.126 -- 3.697 230 -- --
156.91 0.585 10.6 -- -- -- -- -- 0.154 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.78 wind 7.0 270 < th dose independent rect. 16 19
2 29.22 precipitation 0.1 270 < th dose independent rect. 16 19
3 29.22 precipitation 0.1 270 < th dose dependent rect. 16 19
5 29.52 temperature 10.0 270 > th dose independent rect. 11 5
6 29.52 atmosphere 1015.0 270 < th dose independent rect. 11 5
7 29.52 temperature 10.0 270 > th dose independent rect. 16 19
8 29.53 precipitation 0.1 270 < th dose independent rect. 11 5
9 29.53 precipitation 0.1 270 < th dose dependent rect. 11 5
10 29.74 wind 9.0 270 < th dose independent rect. 11 5
11 29.84 wind 1.0 270 > th dose independent rect. 11 5
12 29.91 wind 7.0 270 < th dose independent rect. 17 17
14 29.93 radiation 1.0 270 > th dose independent rect. 11 5
16 30.01 atmosphere 995.0 270 > th dose independent rect. 11 5
18 30.03 radiation 20.0 270 < th dose dependent rect. 21 10
19 30.16 atmosphere 995.0 270 > th dose independent rect. 16 19
20 30.18 temperature 10.0 270 > th dose dependent rect. 4 7
23 30.30 precipitation 0.1 270 < th dose independent rect. 17 17
24 30.30 precipitation 0.1 270 < th dose dependent rect. 17 17
27 30.40 radiation 1.0 270 > th dose independent rect. 17 18
33 30.50 wind 9.0 270 < th dose independent rect. 6 15
34 30.52 humidity 50.0 270 > th dose independent rect. 16 19
36 30.56 temperature 20.0 270 > th dose independent rect. 6 4
38 30.59 humidity 50.0 270 > th dose independent rect. 11 5
39 30.63 temperature 10.0 270 > th dose independent rect. 21 9
40 30.63 temperature 30.0 270 < th dose independent rect. 21 9
41 30.63 humidity 50.0 270 > th dose independent rect. 21 9
44 30.63 atmosphere 995.0 270 > th dose independent rect. 21 9
45 30.63 radiation 20.0 270 < th dose independent rect. 21 9
48 30.63 temperature 10.0 270 > th dose independent rect. 6 15
49 30.64 temperature 10.0 270 > th dose dependent rect. 6 4
53 30.66 temperature 10.0 270 > th dose dependent rect. 7 2
60 30.70 temperature 10.0 270 > th dose independent rect. 10 7
61 30.70 atmosphere 1015.0 270 < th dose independent rect. 10 7
62 30.70 temperature 10.0 270 > th dose independent rect. 17 17
64 30.71 precipitation 0.1 270 < th dose independent rect. 10 7
66 30.71 precipitation 0.1 270 < th dose dependent rect. 10 7
67 30.74 wind 9.0 270 < th dose independent rect. 21 9
74 30.80 precipitation 0.1 270 < th dose independent rect. 6 15
76 30.80 precipitation 0.1 270 < th dose dependent rect. 6 15
85 30.87 humidity 50.0 270 > th dose independent rect. 17 17
91 30.93 atmosphere 1015.0 270 < th dose independent rect. 6 15
102 31.07 humidity 90.0 270 < th dose independent rect. 11 5
103 31.07 wind 9.0 270 < th dose independent rect. 10 7
108 31.09 atmosphere 995.0 270 > th dose independent rect. 17 17
112 31.11 wind 1.0 270 > th dose independent rect. 10 7
114 31.13 temperature 15.0 10 > th dose dependent rect. 8 4
129 31.26 radiation 1.0 270 < th dose independent rect. 21 16
142 31.38 radiation 1.0 270 < th dose independent rect. 21 14
149 31.45 radiation 1.0 270 > th dose independent rect. 4 7
164 31.47 precipitation 0.1 270 < th dose independent rect. 21 9
165 31.47 precipitation 0.1 270 < th dose dependent rect. 21 9
190 31.70 humidity 90.0 270 < th dose independent rect. 12 3
198 31.75 radiation 1.0 270 < th dose dependent rect. 21 16
200 31.76 temperature 20.0 10 > th dose independent rect. 8 4
203 31.78 wind 9.0 10 < th dose independent rect. 18 18
211 31.84 humidity 50.0 270 > th dose dependent rect. 21 9
217 31.88 temperature 10.0 90 > th dose dependent rect. 18 18
225 31.97 temperature 10.0 270 > th dose dependent rect. 11 5
230 32.01 wind 9.0 270 < th dose dependent rect. 7 2
243 32.07 precipitation 0.1 10 < th dose independent rect. 18 18
244 32.07 precipitation 0.1 10 < th dose dependent rect. 18 18
256 32.11 precipitation 0.1 10 < th dose independent rect. 12 6
258 32.11 precipitation 0.1 10 < th dose dependent rect. 12 6
261 32.12 atmosphere 995.0 10 > th dose independent rect. 18 18
262 32.13 radiation 1.0 270 > th dose independent rect. 7 2
263 32.13 temperature 10.0 10 > th dose independent rect. 12 6
265 32.13 atmosphere 1015.0 10 < th dose independent rect. 12 6
266 32.13 temperature 10.0 10 > th dose independent rect. 18 18
267 32.14 wind 9.0 10 < th dose independent rect. 12 6
275 32.16 atmosphere 1015.0 270 < th dose independent rect. 16 19
280 32.18 temperature 10.0 270 > th dose dependent rect. 12 3
308 32.32 radiation 1.0 270 > th dose independent rect. 6 4
311 32.32 wind 9.0 270 < th dose dependent rect. 16 19
321 32.37 wind 5.0 270 < th dose independent rect. 7 2
325 32.39 wind 1.0 10 > th dose independent rect. 12 6
336 32.45 wind 9.0 270 < th dose dependent rect. 6 5
391 32.63 wind 7.0 270 < th dose independent rect. 5 6
397 32.64 atmosphere 995.0 270 > th dose independent rect. 6 15
402 32.65 precipitation 0.1 270 < th dose independent rect. 7 2
403 32.65 precipitation 0.1 270 < th dose dependent rect. 7 2
405 32.66 precipitation 0.1 270 < th dose independent rect. 5 6
407 32.66 precipitation 0.1 270 < th dose dependent rect. 5 6
415 32.68 temperature 10.0 270 > th dose independent rect. 7 2
417 32.68 humidity 50.0 270 > th dose independent rect. 7 2
418 32.68 atmosphere 995.0 270 > th dose independent rect. 7 2
419 32.68 atmosphere 1015.0 270 < th dose independent rect. 7 2
421 32.68 humidity 90.0 90 < th dose independent rect. 7 5
423 32.68 temperature 10.0 1440 > th dose independent rect. 13 6
427 32.68 temperature 10.0 1440 > th dose independent rect. 19 18
430 32.68 atmosphere 995.0 1440 > th dose independent rect. 19 18
432 32.68 temperature 10.0 270 > th dose independent rect. 9 22
435 32.70 wind 1.0 270 > th dose independent rect. 16 19
447 32.76 atmosphere 995.0 270 > th dose independent rect. 5 6
448 32.76 atmosphere 1015.0 270 < th dose independent rect. 5 6
449 32.76 wind 9.0 270 < th dose independent rect. 16 7
450 32.76 temperature 10.0 270 > th dose independent rect. 11 18
464 32.83 humidity 50.0 270 > th dose independent rect. 5 6
469 32.85 radiation 30.0 270 < th dose independent rect. 16 7
473 32.86 temperature 10.0 270 > th dose independent rect. 16 7
475 32.86 temperature 10.0 270 > th dose independent rect. 23 17
489 32.90 humidity 90.0 10 < th dose independent rect. 8 4
508 32.94 temperature 30.0 270 < th dose independent rect. 7 2
520 32.96 radiation 40.0 270 < th dose independent rect. 17 17
526 32.98 radiation 1.0 270 < th dose independent sin 9 NA
528 32.98 atmosphere 995.0 10 > th dose independent rect. 12 6
546 33.02 wind 9.0 270 < th dose dependent rect. 12 3
548 33.03 atmosphere 995.0 270 > th dose dependent rect. 11 5
567 33.07 humidity 50.0 90 > th dose dependent rect. 23 9
571 33.08 precipitation 0.1 270 < th dose independent rect. 16 7
577 33.08 precipitation 0.1 270 < th dose dependent rect. 16 7
583 33.10 radiation 1.0 270 > th dose independent sin 9 NA
602 33.12 atmosphere 1015.0 270 < th dose independent rect. 23 17
621 33.14 wind 9.0 270 < th dose independent rect. 11 18
654 33.18 radiation 1.0 270 < th dose dependent sin 8 NA
670 33.21 wind 9.0 270 < th dose independent rect. 23 17
690 33.24 radiation 40.0 270 < th dose independent rect. 7 2
713 33.27 wind 1.0 270 > th dose independent rect. 16 7
729 33.29 wind 9.0 10 < th dose independent rect. 8 4
761 33.34 atmosphere 1015.0 270 < th dose dependent rect. 12 3
769 33.35 atmosphere 1015.0 270 < th dose independent rect. 21 9
773 33.36 atmosphere 995.0 270 > th dose independent rect. 23 17
787 33.38 precipitation 0.1 270 < th dose independent rect. 11 18
788 33.38 precipitation 0.1 270 < th dose dependent rect. 11 18
789 33.39 radiation 40.0 10 < th dose independent rect. 12 6
791 33.39 atmosphere 995.0 270 > th dose dependent rect. 12 3
803 33.41 radiation 40.0 270 < th dose independent rect. 16 19
823 33.45 wind 1.0 10 > th dose independent rect. 8 4
834 33.49 temperature 30.0 270 < th dose independent rect. 17 17
835 33.49 precipitation 0.1 270 < th dose independent rect. 23 17
837 33.49 radiation 40.0 270 < th dose dependent rect. 16 6
838 33.49 precipitation 0.1 270 < th dose dependent rect. 23 17
842 33.50 wind 9.0 270 < th dose dependent rect. 11 5
845 33.51 wind 1.0 270 > th dose independent rect. 6 15
855 33.52 atmosphere 995.0 270 > th dose independent rect. 16 7
872 33.56 temperature 10.0 10 > th dose independent rect. 8 4
874 33.56 atmosphere 995.0 10 > th dose independent rect. 8 4
875 33.56 atmosphere 1015.0 10 < th dose independent rect. 8 4
876 33.56 precipitation 0.1 10 < th dose independent rect. 8 4
882 33.56 temperature 10.0 10 > th dose independent rect. 12 20
883 33.56 precipitation 0.1 10 < th dose dependent rect. 8 4
898 33.58 wind 9.0 270 < th dose independent rect. 9 22
909 33.62 radiation 1.0 10 > th dose independent rect. 8 4
916 33.63 wind 1.0 90 > th dose independent rect. 18 18
939 33.69 atmosphere 995.0 270 > th dose independent rect. 11 18
943 33.70 humidity 50.0 10 > th dose independent rect. 12 6
979 33.75 wind 9.0 10 < th dose independent rect. 12 20
982 33.76 wind 1.0 90 > th dose independent rect. 7 5
999 33.78 temperature 30.0 270 < th dose independent rect. 16 19