Os10g0475000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0475000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.47 | 0.615 | 10.9 | 0.745 | 0.661 | -5.07 | 0.436 | -6.25 | 0.589 | 2.75 | 0.9815 | 1450 | -- | -- |
| 187 | 0.637 | 11 | 0.166 | 0.691 | -3.69 | 0.139 | -- | 0.541 | 2.38 | 1.667 | 1455 | -- | -- |
| 170.54 | 0.608 | 10.8 | 0.991 | 0.69 | -5.61 | -- | -8.87 | 0.719 | 2.45 | 0.6143 | 1452 | -- | -- |
| 185.29 | 0.634 | 11 | 0.238 | 0.68 | -3.71 | -- | -- | 0.491 | 2.7 | 2.108 | 1453 | -- | -- |
| 185.34 | 0.634 | 10.8 | 0.942 | -- | -5.72 | -- | -8.82 | 0.641 | -- | 0.6188 | 1430 | -- | -- |
| 348.01 | 0.875 | 10.9 | 1 | 0.623 | -- | 0.877 | -- | 0.985 | 3.52 | -- | -- | -- | -- |
| 350.38 | 0.877 | 10.9 | 0.988 | 0.627 | -- | -- | -- | 0.98 | 3.45 | -- | -- | -- | -- |
| 201.83 | 0.662 | 11 | 0.258 | -- | -3.67 | -- | -- | 0.473 | -- | 2.202 | 1420 | -- | -- |
| 186.57 | 0.636 | 11 | -- | 0.707 | -3.85 | -- | -- | 0.46 | 2.56 | 2.058 | 1455 | -- | -- |
| 372.41 | 0.902 | 10.9 | 1.01 | -- | -- | -- | -- | 0.996 | -- | -- | -- | -- | -- |
| 376.1 | 0.907 | 10.9 | -- | 0.646 | -- | -- | -- | 0.87 | 3.44 | -- | -- | -- | -- |
| 203.26 | 0.664 | 11 | -- | -- | -3.71 | -- | -- | 0.436 | -- | 2.184 | 1420 | -- | -- |
| 399.54 | 0.933 | 10.9 | -- | -- | -- | -- | -- | 0.884 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.11 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 15 | 157.88 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 33 | 160.72 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 35 | 160.79 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 53 | 162.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 59 | 162.29 | humidity | 90 | 43200 | > th | dose dependent | sin | 17 | NA |
| 61 | 162.67 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 64 | 162.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 65 | 163.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 76 | 163.59 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 79 | 163.73 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 82 | 163.79 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 90 | 163.95 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 91 | 163.97 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 103 | 164.10 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 105 | 164.14 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 110 | 164.20 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 125 | 164.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 128 | 164.35 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 162 | 164.56 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 171 | 164.70 | temperature | 25 | 14400 | > th | dose dependent | sin | 19 | NA |
| 180 | 164.74 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 185 | 164.77 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 188 | 164.78 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 189 | 164.78 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 195 | 164.81 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 200 | 164.83 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 207 | 164.86 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 215 | 164.90 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 275 | 165.25 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 309 | 165.44 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 318 | 165.48 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 319 | 165.49 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 450 | 165.90 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 455 | 165.92 | humidity | 90 | 43200 | > th | dose independent | sin | 17 | NA |
| 461 | 165.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 474 | 165.96 | temperature | 20 | 14400 | > th | dose dependent | sin | 12 | NA |
| 484 | 165.98 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 535 | 166.14 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 571 | 166.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 577 | 166.36 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 584 | 166.39 | temperature | 25 | 14400 | < th | dose independent | sin | 14 | NA |
| 595 | 166.44 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 597 | 166.47 | humidity | 90 | 43200 | < th | dose independent | sin | 17 | NA |
| 604 | 166.50 | temperature | 25 | 14400 | > th | dose independent | sin | 14 | NA |
| 631 | 166.63 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 732 | 167.08 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 749 | 167.15 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 750 | 167.15 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 803 | 167.45 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 920 | 168.03 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 943 | 168.17 | temperature | 25 | 14400 | < th | dose independent | sin | 6 | NA |
| 945 | 168.17 | temperature | 25 | 14400 | > th | dose independent | rect. | 3 | 9 |
| 952 | 168.21 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 10 |
| 953 | 168.22 | temperature | 25 | 14400 | > th | dose independent | sin | 6 | NA |
| 962 | 168.26 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |
| 964 | 168.27 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 969 | 168.28 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 970 | 168.28 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 994 | 168.36 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 23 |