Os10g0474800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Long-chain fatty alcohol dehydrogenase family protein.
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Os10g0474800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Long-chain fatty alcohol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.73 | 0.583 | 9.56 | 1.48 | 0.656 | -2.38 | 0.713 | -1.05 | 0.457 | 23.5 | 1.02 | 1450 | -- | -- |
| 153.62 | 0.577 | 9.56 | 1.42 | 0.724 | -2.21 | 0.598 | -- | 0.453 | 23.4 | 1.461 | 1463 | -- | -- |
| 155.86 | 0.581 | 9.56 | 1.44 | 0.656 | -2.39 | -- | -0.911 | 0.456 | 23.3 | 1.01 | 1450 | -- | -- |
| 154.72 | 0.579 | 9.56 | 1.41 | 0.664 | -2.21 | -- | -- | 0.426 | 23.2 | 1.54 | 1455 | -- | -- |
| 161.67 | 0.592 | 9.57 | 1.46 | -- | -2.36 | -- | -0.767 | 0.411 | -- | 1.55 | 1363 | -- | -- |
| 219.17 | 0.694 | 9.51 | 1.79 | 0.566 | -- | 0.872 | -- | 0.712 | 23.8 | -- | -- | -- | -- |
| 222.37 | 0.698 | 9.51 | 1.76 | 0.564 | -- | -- | -- | 0.71 | 23.5 | -- | -- | -- | -- |
| 161.47 | 0.592 | 9.57 | 1.41 | -- | -2.26 | -- | -- | 0.42 | -- | 1.54 | 1362 | -- | -- |
| 198.55 | 0.656 | 9.56 | -- | 0.739 | -2.8 | -- | -- | 0.311 | 22.8 | 0.8496 | 1450 | -- | -- |
| 242.37 | 0.727 | 9.5 | 1.78 | -- | -- | -- | -- | 0.716 | -- | -- | -- | -- | -- |
| 304.03 | 0.816 | 9.55 | -- | 0.584 | -- | -- | -- | 0.514 | 23.7 | -- | -- | -- | -- |
| 204.49 | 0.666 | 9.56 | -- | -- | -2.86 | -- | -- | 0.255 | -- | 0.6732 | 1382 | -- | -- |
| 325.52 | 0.842 | 9.54 | -- | -- | -- | -- | -- | 0.519 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.33 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 3 | 150.63 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 10 | 152.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 25 | 152.72 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 31 | 153.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 50 | 153.78 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 52 | 153.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 53 | 153.83 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 54 | 153.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 60 | 153.94 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 61 | 153.95 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 74 | 153.97 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 75 | 153.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 76 | 154.00 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 85 | 154.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 88 | 154.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 95 | 154.11 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 108 | 154.18 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 124 | 154.25 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 181 | 154.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 187 | 154.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 188 | 154.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 194 | 154.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 200 | 154.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 202 | 154.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 209 | 154.75 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 213 | 154.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 217 | 154.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 220 | 154.80 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 226 | 154.87 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 9 |
| 237 | 154.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 266 | 155.31 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 268 | 155.35 | radiation | 1 | 1440 | < th | dose independent | sin | 13 | NA |
| 277 | 155.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 284 | 155.73 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 288 | 155.84 | radiation | 1 | 1440 | < th | dose independent | sin | 0 | NA |
| 290 | 155.85 | radiation | 1 | 1440 | > th | dose independent | sin | 0 | NA |
| 300 | 156.01 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 305 | 156.05 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 333 | 156.68 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 338 | 156.77 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 11 |
| 382 | 157.68 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 13 |
| 401 | 157.78 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 412 | 157.89 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 425 | 158.09 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 16 |
| 431 | 158.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 433 | 158.20 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 441 | 158.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 449 | 158.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 454 | 158.39 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 461 | 158.42 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 468 | 158.48 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 504 | 158.71 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 511 | 158.74 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 524 | 158.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 546 | 158.94 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 8 |
| 556 | 159.04 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 565 | 159.10 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 577 | 159.17 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 589 | 159.22 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 592 | 159.24 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 602 | 159.26 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 18 |
| 655 | 159.59 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 11 |
| 672 | 159.69 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 693 | 159.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 750 | 159.90 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 762 | 159.93 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 764 | 159.94 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 767 | 159.98 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 768 | 159.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 769 | 159.98 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 786 | 160.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 787 | 160.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 790 | 160.08 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 5 |
| 812 | 160.12 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 820 | 160.14 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 845 | 160.23 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 846 | 160.23 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 891 | 160.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 898 | 160.37 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 904 | 160.39 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 968 | 160.56 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 982 | 160.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 2 |