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Os10g0473900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.43 (0.0265) R2 : 0.409
β1 : 1 (0.111) R2dD : 0.156 R2D : -0.223
β2 : 0.637 (0.0664) R2dC : 0.12 R2C : 0.0234
β3 : -1.31 (0.119) R2dE : 0.267 R2E : -0.27
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.887 (0.0637) R2dN8 : 0.464 R2N8 : 0.0402
σ : 0.475
deviance : 104.11
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C
peak time of C : 6.09
E
wheather : temperature
threshold : 10.2
memory length : 7958
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.43 0.478 6.41 1.14 0.663 -1.18 0.253 1.08 0.826 6.24 10.45 4455 -- --
103.87 0.475 6.43 1.01 0.64 -1.29 0.397 -- 0.876 5.99 10.6 7981 -- --
103.59 0.474 6.41 1.15 0.664 -1.18 -- 1.1 0.827 6.24 10.3 4450 -- --
104.11 0.475 6.43 1 0.637 -1.31 -- -- 0.887 6.09 10.2 7958 -- --
125.15 0.521 6.42 1.14 -- -1.2 -- 1.23 0.845 -- 10.3 3463 -- --
131.58 0.538 6.51 0.325 0.641 -- 0.315 -- 0.519 6.42 -- -- -- --
131.83 0.538 6.51 0.329 0.642 -- -- -- 0.518 6.44 -- -- -- --
124.57 0.52 6.45 0.985 -- -1.31 -- -- 0.839 -- 6.617 6363 -- --
117.6 0.508 6.48 -- 0.572 -1.27 -- -- 0.632 8.63 10.2 7958 -- --
153.28 0.579 6.52 0.345 -- -- -- -- 0.532 -- -- -- -- --
134.68 0.543 6.52 -- 0.647 -- -- -- 0.482 6.41 -- -- -- --
123.16 0.517 6.49 -- -- -1.43 -- -- 0.66 -- -0.5612 438 -- --
156.43 0.584 6.53 -- -- -- -- -- 0.494 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 94.28 wind 9 43200 > th dose dependent rect. 13 19
2 94.39 wind 7 43200 > th dose dependent rect. 6 15
4 94.43 wind 7 43200 > th dose dependent rect. 13 21
7 94.54 wind 7 43200 > th dose dependent rect. 2 19
8 94.56 wind 7 43200 > th dose dependent rect. 23 22
13 94.69 wind 9 43200 > th dose independent rect. 13 21
14 94.72 wind 9 43200 < th dose independent rect. 13 21
15 94.72 wind 9 43200 > th dose dependent sin 14 NA
21 94.76 wind 9 43200 > th dose independent rect. 17 22
22 94.78 wind 9 43200 < th dose independent rect. 17 22
24 94.82 wind 9 43200 > th dose dependent rect. 18 13
27 94.85 wind 7 43200 > th dose dependent rect. 5 20
32 94.91 wind 7 43200 > th dose dependent rect. 17 23
72 95.14 wind 9 43200 > th dose dependent sin 17 NA
76 95.17 wind 7 43200 > th dose dependent no NA NA
88 95.22 wind 7 43200 > th dose dependent rect. 20 23
90 95.27 wind 7 43200 > th dose independent rect. 6 1
91 95.29 wind 9 43200 > th dose dependent rect. 19 5
140 95.59 wind 9 43200 > th dose independent rect. 5 16
144 95.60 wind 9 43200 < th dose independent rect. 23 22
149 95.66 wind 9 43200 > th dose independent rect. 24 21
155 95.67 wind 9 43200 < th dose independent rect. 6 15
157 95.67 wind 9 43200 > th dose independent rect. 2 19
159 95.68 wind 9 43200 > th dose independent rect. 18 13
169 95.72 wind 9 43200 < th dose independent rect. 2 19
172 95.73 wind 7 43200 > th dose dependent sin 0 NA
201 95.94 wind 9 43200 > th dose independent rect. 5 20
208 95.97 wind 9 43200 > th dose independent rect. 5 22
222 96.02 wind 9 43200 < th dose independent rect. 6 21
227 96.03 wind 9 43200 > th dose independent rect. 18 6
236 96.05 wind 9 43200 < th dose independent rect. 6 19
241 96.05 wind 9 43200 > th dose independent rect. 2 23
266 96.11 wind 9 43200 > th dose independent no NA NA
282 96.13 wind 9 43200 < th dose independent rect. 2 23
296 96.16 wind 9 43200 < th dose independent no NA NA
320 96.21 wind 9 43200 > th dose independent sin 13 NA
340 96.27 atmosphere 995 43200 < th dose independent rect. 7 9
365 96.33 atmosphere 995 43200 > th dose independent rect. 7 9
371 96.35 wind 9 43200 > th dose independent rect. 18 9
376 96.35 wind 9 43200 > th dose dependent rect. 19 2
390 96.39 wind 9 43200 < th dose independent rect. 20 23
398 96.41 wind 9 43200 < th dose independent rect. 18 13
402 96.42 wind 9 43200 < th dose independent rect. 18 6
417 96.52 wind 9 43200 > th dose independent rect. 20 23
437 96.59 wind 9 43200 < th dose independent rect. 18 9
504 96.79 wind 9 43200 > th dose dependent rect. 10 15
520 96.83 wind 7 43200 < th dose independent rect. 6 1
522 96.83 wind 9 43200 > th dose dependent rect. 10 17
525 96.84 wind 9 43200 > th dose dependent rect. 10 13
529 96.85 wind 9 43200 > th dose dependent rect. 10 11
549 96.89 atmosphere 995 43200 < th dose dependent rect. 15 1
570 96.95 atmosphere 995 43200 < th dose independent rect. 14 1
572 96.95 wind 5 43200 < th dose independent rect. 4 20
599 97.00 wind 5 43200 > th dose dependent rect. 18 3
612 97.01 wind 5 43200 < th dose independent rect. 13 21
624 97.04 wind 5 43200 < th dose independent rect. 11 21
631 97.05 wind 5 43200 > th dose independent rect. 13 20
640 97.06 wind 5 43200 > th dose independent rect. 4 20
642 97.06 wind 5 43200 > th dose independent rect. 11 21
648 97.07 wind 5 43200 > th dose independent rect. 4 17
666 97.09 wind 5 43200 < th dose independent rect. 4 17
707 97.15 wind 9 43200 < th dose independent sin 13 NA
745 97.19 wind 5 43200 < th dose independent rect. 23 22
824 97.28 wind 5 43200 > th dose independent rect. 23 22
826 97.28 wind 3 43200 > th dose dependent rect. 5 11
828 97.29 wind 5 43200 > th dose independent rect. 15 16
849 97.31 wind 3 43200 > th dose dependent sin 1 NA
914 97.40 wind 9 43200 < th dose independent rect. 24 15
959 97.45 wind 9 43200 < th dose independent sin 0 NA
984 97.47 wind 5 43200 < th dose independent no NA NA
985 97.47 wind 9 43200 < th dose independent rect. 6 9