Os10g0473200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0473200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.99 | 0.517 | 9.75 | -1.74 | 1.85 | 1.84 | 1.37 | 1.23 | -1.27 | 2.96 | 22.95 | 1051 | -- | -- |
| 122.76 | 0.516 | 9.74 | -1.57 | 1.87 | 1.65 | 1.27 | -- | -1.28 | 2.95 | 22.85 | 1047 | -- | -- |
| 126.88 | 0.525 | 9.74 | -1.69 | 1.85 | 1.9 | -- | 0.908 | -1.25 | 2.94 | 22.7 | 1075 | -- | -- |
| 127.36 | 0.526 | 9.73 | -1.6 | 1.85 | 1.7 | -- | -- | -1.25 | 2.96 | 22.82 | 1064 | -- | -- |
| 202.16 | 0.662 | 9.71 | -1.61 | -- | 2.77 | -- | 1.09 | -1.12 | -- | 32.72 | 87 | -- | -- |
| 154.09 | 0.582 | 9.78 | -2.04 | 1.74 | -- | 1.41 | -- | -1.51 | 3.19 | -- | -- | -- | -- |
| 160.51 | 0.593 | 9.79 | -2.06 | 1.74 | -- | -- | -- | -1.52 | 3.16 | -- | -- | -- | -- |
| 203.27 | 0.664 | 9.69 | -1.42 | -- | 2.86 | -- | -- | -1.07 | -- | 33.35 | 86 | -- | -- |
| 171.88 | 0.611 | 9.67 | -- | 1.77 | 2.45 | -- | -- | -0.943 | 3.11 | 21.64 | 8109 | -- | -- |
| 332.93 | 0.853 | 9.79 | -1.99 | -- | -- | -- | -- | -1.47 | -- | -- | -- | -- | -- |
| 272.85 | 0.773 | 9.74 | -- | 1.7 | -- | -- | -- | -1.29 | 3.15 | -- | -- | -- | -- |
| 252.54 | 0.74 | 9.65 | -- | -- | 3.47 | -- | -- | -0.864 | -- | 41.74 | 96 | -- | -- |
| 437.44 | 0.976 | 9.74 | -- | -- | -- | -- | -- | -1.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.47 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 4 | 121.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 5 | 121.23 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 13 |
| 6 | 121.38 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 10 | 121.48 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 11 |
| 13 | 122.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 22 | 122.54 | temperature | 25 | 720 | < th | dose dependent | sin | 3 | NA |
| 24 | 122.64 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 27 | 122.77 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 18 |
| 29 | 122.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 13 |
| 31 | 122.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 78 | 123.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 79 | 123.72 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 15 |
| 82 | 123.79 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 91 | 123.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 96 | 124.01 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 9 |
| 97 | 124.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 103 | 124.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 125 | 124.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 191 | 124.53 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 194 | 124.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 198 | 124.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 203 | 124.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 235 | 124.68 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 283 | 124.96 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 15 |
| 301 | 125.05 | temperature | 20 | 720 | < th | dose independent | sin | 4 | NA |
| 322 | 125.14 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 329 | 125.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 346 | 125.24 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 360 | 125.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 506 | 125.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 507 | 125.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 549 | 125.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 656 | 126.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 885 | 126.76 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 896 | 126.78 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 897 | 126.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 908 | 126.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 974 | 126.96 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |