Os10g0471100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sterol desaturase family protein.
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Os10g0471100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sterol desaturase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.39 | 0.645 | 3.17 | 0.395 | 0.458 | 0.71 | 0.35 | 1.24 | 0.535 | 3.68 | 29.23 | 1138 | -- | -- |
| 188.99 | 0.64 | 3.22 | 0.115 | 0.444 | 0.874 | 0.447 | -- | 0.444 | 3.82 | 29.2 | 1129 | -- | -- |
| 188.7 | 0.64 | 3.17 | 0.396 | 0.463 | 0.721 | -- | 1.29 | 0.533 | 3.9 | 29.28 | 1132 | -- | -- |
| 189.22 | 0.641 | 3.21 | 0.0899 | 0.469 | 0.87 | -- | -- | 0.455 | 4.08 | 29.24 | 1129 | -- | -- |
| 199.59 | 0.658 | 3.17 | 0.431 | -- | 0.787 | -- | 1.42 | 0.515 | -- | 29 | 1158 | -- | -- |
| 217.48 | 0.691 | 3.19 | 0.355 | 0.563 | -- | 0.692 | -- | 0.542 | 2.62 | -- | -- | -- | -- |
| 219.1 | 0.693 | 3.19 | 0.337 | 0.57 | -- | -- | -- | 0.538 | 2.85 | -- | -- | -- | -- |
| 200.76 | 0.66 | 3.21 | 0.0892 | -- | 0.909 | -- | -- | 0.464 | -- | 29.26 | 1151 | -- | -- |
| 189.41 | 0.641 | 3.21 | -- | 0.468 | 0.876 | -- | -- | 0.446 | 4.06 | 29.25 | 1129 | -- | -- |
| 237.87 | 0.721 | 3.19 | 0.362 | -- | -- | -- | -- | 0.553 | -- | -- | -- | -- | -- |
| 222.1 | 0.697 | 3.2 | -- | 0.576 | -- | -- | -- | 0.5 | 2.86 | -- | -- | -- | -- |
| 200.96 | 0.66 | 3.21 | -- | -- | 0.924 | -- | -- | 0.453 | -- | 29.24 | 1151 | -- | -- |
| 241.32 | 0.725 | 3.19 | -- | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 184.13 | temperature | 25.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 5 | 186.83 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 6 | 186.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 7 | 186.98 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 10 | 187.09 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 12 | 187.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 21 | 187.56 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 23 | 187.59 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 29 | 187.93 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 35 | 188.14 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 38 | 188.24 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 42 | 188.46 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 9 |
| 44 | 188.48 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 70 | 188.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 74 | 188.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 84 | 189.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 87 | 189.02 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 89 | 189.04 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 107 | 189.27 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 128 | 189.31 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 139 | 189.43 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 144 | 189.46 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 171 | 189.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 174 | 189.75 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 179 | 189.80 | temperature | 25.0 | 720 | > th | dose independent | sin | 15 | NA |
| 194 | 189.92 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 229 | 190.19 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 243 | 190.19 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 249 | 190.25 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 266 | 190.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 268 | 190.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 272 | 190.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 275 | 190.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 276 | 190.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 278 | 190.39 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 306 | 190.48 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 310 | 190.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 365 | 190.81 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 385 | 190.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 386 | 190.87 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 387 | 190.88 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 388 | 190.88 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 390 | 190.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 393 | 190.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 417 | 191.00 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 419 | 191.02 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 420 | 191.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 425 | 191.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 439 | 191.06 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 459 | 191.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 464 | 191.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 469 | 191.22 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 478 | 191.26 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 3 |
| 495 | 191.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 525 | 191.40 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 9 |
| 528 | 191.44 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 531 | 191.46 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 579 | 191.60 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 582 | 191.61 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 585 | 191.61 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 618 | 191.68 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 654 | 191.79 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 671 | 191.83 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 794 | 192.04 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 5 |
| 798 | 192.04 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 920 | 192.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 947 | 192.27 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 965 | 192.29 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 2 | NA |