Os10g0469700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, typical subtype containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0469700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Leucine-rich repeat, typical subtype containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.24 | 0.58 | 10.5 | 1.54 | 0.747 | 1.4 | -0.343 | -0.983 | 0.655 | 0.644 | 20.17 | 3491 | -- | -- |
| 153.61 | 0.577 | 10.4 | 1.67 | 0.724 | 1.59 | -0.342 | -- | 0.698 | 0.576 | 20.09 | 3802 | -- | -- |
| 151.74 | 0.574 | 10.5 | 1.62 | 0.707 | 1.33 | -- | -1.01 | 0.712 | 0.249 | 20.02 | 2649 | -- | -- |
| 154.08 | 0.578 | 10.4 | 1.7 | 0.738 | 1.59 | -- | -- | 0.696 | 0.614 | 20.04 | 3541 | -- | -- |
| 182.25 | 0.629 | 10.5 | 1.6 | -- | 1.41 | -- | -1.16 | 0.675 | -- | 20.03 | 2527 | -- | -- |
| 199.25 | 0.662 | 10.3 | 2.61 | 0.795 | -- | -0.383 | -- | 1.11 | 0.596 | -- | -- | -- | -- |
| 199.87 | 0.662 | 10.3 | 2.63 | 0.796 | -- | -- | -- | 1.11 | 0.533 | -- | -- | -- | -- |
| 183.92 | 0.632 | 10.4 | 1.8 | -- | 1.69 | -- | -- | 0.74 | -- | 19.6 | 2476 | -- | -- |
| 155.77 | 0.581 | 10.5 | -- | 0.79 | 2.53 | -- | -- | 0.282 | 0.488 | 17.8 | 47291 | -- | -- |
| 239.63 | 0.723 | 10.3 | 2.65 | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
| 381.78 | 0.914 | 10.4 | -- | 0.836 | -- | -- | -- | 0.822 | 0.688 | -- | -- | -- | -- |
| 191.23 | 0.644 | 10.5 | -- | -- | 2.53 | -- | -- | 0.282 | -- | 17.8 | 47140 | -- | -- |
| 425.55 | 0.963 | 10.4 | -- | -- | -- | -- | -- | 0.834 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 147.34 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 4 | 148.05 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 5 | 148.32 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 7 | 148.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 9 | 148.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 11 | 148.74 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 12 | 148.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 18 |
| 13 | 148.78 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 14 | 148.79 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 18 | 148.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 42 | 149.29 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 52 | 149.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 53 | 149.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 56 | 149.31 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 72 | 149.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 82 | 149.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 115 | 149.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 148 | 150.04 | radiation | 1.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 153 | 150.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 154 | 150.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 155 | 150.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 158 | 150.11 | radiation | 1.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 190 | 150.31 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 204 | 150.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 210 | 150.41 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 228 | 150.43 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 240 | 150.44 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 243 | 150.45 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 244 | 150.45 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 254 | 150.50 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 303 | 150.75 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 313 | 150.84 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 322 | 150.88 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 400 | 150.99 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 465 | 151.27 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 525 | 151.42 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 528 | 151.43 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 534 | 151.48 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 536 | 151.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 541 | 151.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 544 | 151.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 561 | 151.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 563 | 151.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 564 | 151.54 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 609 | 151.55 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 22 |
| 614 | 151.56 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 18 |
| 638 | 151.66 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 659 | 151.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 669 | 151.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 22 |
| 717 | 151.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 740 | 152.04 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 797 | 152.17 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 810 | 152.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 818 | 152.26 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 835 | 152.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 854 | 152.34 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 855 | 152.35 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 935 | 152.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 937 | 152.61 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 945 | 152.63 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 961 | 152.65 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 978 | 152.70 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 990 | 152.74 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 9 |