Os10g0469100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0469100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.14 | 0.305 | 9 | 1.93 | 0.769 | -1.8 | 0.511 | -0.664 | 0.548 | 1.87 | 23.96 | 7910 | -- | -- |
| 42.37 | 0.303 | 9.02 | 1.9 | 0.769 | -1.6 | 0.52 | -- | 0.533 | 1.87 | 24.5 | 7949 | -- | -- |
| 42.98 | 0.305 | 8.97 | 1.93 | 0.751 | -2.06 | -- | -1.34 | 0.563 | 1.85 | 23.2 | 7948 | -- | -- |
| 43.39 | 0.307 | 9.03 | 1.88 | 0.771 | -1.6 | -- | -- | 0.533 | 1.85 | 24.58 | 7853 | -- | -- |
| 78.19 | 0.412 | 8.98 | 1.91 | -- | -2.09 | -- | -1.28 | 0.542 | -- | 23.75 | 8141 | -- | -- |
| 74.22 | 0.404 | 8.93 | 2.78 | 0.816 | -- | 0.507 | -- | 0.955 | 1.81 | -- | -- | -- | -- |
| 75.22 | 0.406 | 8.93 | 2.76 | 0.816 | -- | -- | -- | 0.952 | 1.79 | -- | -- | -- | -- |
| 78.14 | 0.412 | 9.03 | 1.89 | -- | -1.65 | -- | -- | 0.515 | -- | 25.8 | 8169 | -- | -- |
| 51.83 | 0.335 | 9.13 | -- | 0.76 | -2.47 | -- | -- | 0.0656 | 1.8 | 22.22 | 47520 | -- | -- |
| 115.58 | 0.502 | 8.92 | 2.8 | -- | -- | -- | -- | 0.97 | -- | -- | -- | -- | -- |
| 276.54 | 0.778 | 9 | -- | 0.867 | -- | -- | -- | 0.644 | 1.88 | -- | -- | -- | -- |
| 88.32 | 0.438 | 9.13 | -- | -- | -2.51 | -- | -- | 0.0391 | -- | 22.48 | 47520 | -- | -- |
| 321.96 | 0.838 | 8.99 | -- | -- | -- | -- | -- | 0.66 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.10 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 2 | 41.19 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 3 | 41.75 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 6 | 42.59 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 10 | 42.71 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 13 | 42.74 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 57 | 42.87 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 86 | 42.92 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 10 | 19 |
| 114 | 42.97 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 1 | 13 |
| 232 | 43.16 | temperature | 20.0 | 14400 | < th | dose dependent | no | NA | NA |
| 261 | 43.20 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 346 | 43.79 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 369 | 44.10 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 370 | 44.12 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 406 | 44.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 417 | 44.31 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 445 | 44.39 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 457 | 44.42 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 474 | 44.45 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 486 | 44.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 487 | 44.47 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 534 | 44.54 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 535 | 44.54 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 546 | 44.55 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 648 | 44.67 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 653 | 44.67 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 673 | 44.70 | temperature | 25.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 684 | 44.71 | temperature | 25.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 685 | 44.71 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 686 | 44.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 687 | 44.71 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 689 | 44.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 721 | 44.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 722 | 44.75 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 723 | 44.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 737 | 44.77 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 746 | 44.77 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 18 |
| 751 | 44.78 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 765 | 44.79 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 766 | 44.79 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 4 | 15 |
| 768 | 44.80 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 770 | 44.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 781 | 44.81 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 792 | 44.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 795 | 44.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 812 | 44.84 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 833 | 44.86 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 838 | 44.86 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 8 | 15 |
| 839 | 44.86 | temperature | 15.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 901 | 44.91 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 936 | 44.94 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 950 | 44.95 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 971 | 44.97 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 1 |