Os10g0468800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine rich repeat, N-terminal domain containing protein.
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Os10g0468800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine rich repeat, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.84 | 0.3 | 2.59 | 1.32 | 0.0735 | -15.5 | 0.224 | 94.8 | 0.0646 | 9.47 | 994.7 | 744 | -- | -- |
| 166.74 | 0.601 | 2.81 | 0.106 | 0.137 | -11.1 | 0.0897 | -- | 0.0412 | 10.2 | 994.6 | 31 | -- | -- |
| 41.02 | 0.298 | 2.59 | 1.33 | 0.0728 | -15.5 | -- | 94.9 | 0.0647 | 9.17 | 994.7 | 747 | -- | -- |
| 42.48 | 0.304 | 2.8 | 0.101 | 0.0767 | 0.0663 | -- | -- | 0.0597 | 8.3 | 994.7 | 150 | -- | -- |
| 41.32 | 0.299 | 2.59 | 1.37 | -- | -16.1 | -- | 98.4 | 0.064 | -- | 994.7 | 747 | -- | -- |
| 42.32 | 0.305 | 2.8 | 0.0959 | 0.0736 | -- | 0.224 | -- | 0.0605 | 8.73 | -- | -- | -- | -- |
| 42.48 | 0.305 | 2.8 | 0.103 | 0.0738 | -- | -- | -- | 0.0604 | 8.43 | -- | -- | -- | -- |
| 42.55 | 0.304 | 2.8 | 0.0885 | -- | 0.182 | -- | -- | 0.0564 | -- | 998.2 | 220 | -- | -- |
| 42.44 | 0.303 | 2.8 | -- | 0.0786 | 0.251 | -- | -- | 0.0507 | 8.39 | 997.7 | 122 | -- | -- |
| 42.79 | 0.306 | 2.8 | 0.103 | -- | -- | -- | -- | 0.0611 | -- | -- | -- | -- | -- |
| 42.76 | 0.306 | 2.8 | -- | 0.0742 | -- | -- | -- | 0.0489 | 8.33 | -- | -- | -- | -- |
| 42.75 | 0.305 | 2.8 | -- | -- | 0.262 | -- | -- | 0.0546 | -- | 997.6 | 178 | -- | -- |
| 43.07 | 0.306 | 2.8 | -- | -- | -- | -- | -- | 0.0496 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.41 | wind | 1.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 3 | 34.79 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 5 | 36.28 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 6 | 36.28 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 77 | 37.54 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 81 | 37.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 84 | 37.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 88 | 37.59 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 94 | 37.59 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 95 | 37.59 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 115 | 37.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 118 | 37.61 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 119 | 37.63 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 120 | 37.64 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 123 | 37.66 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 124 | 37.66 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 126 | 37.67 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 128 | 37.69 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 129 | 37.69 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 134 | 37.70 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 137 | 37.70 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 138 | 37.70 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 141 | 37.70 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 143 | 37.70 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 145 | 37.70 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 150 | 37.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 151 | 37.70 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 152 | 37.70 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 157 | 37.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 158 | 37.71 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 159 | 37.71 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 160 | 37.72 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 163 | 37.74 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 171 | 37.88 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 172 | 37.89 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 180 | 38.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 195 | 38.39 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 197 | 38.41 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 229 | 38.60 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 230 | 38.63 | radiation | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 312 | 38.90 | radiation | 30.0 | 90 | > th | dose independent | sin | 11 | NA |
| 339 | 39.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 342 | 39.15 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 343 | 39.16 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 387 | 39.30 | radiation | 40.0 | 30 | < th | dose independent | sin | 11 | NA |
| 456 | 39.40 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 478 | 39.44 | wind | 1.0 | 270 | < th | dose independent | rect. | 6 | 4 |
| 483 | 39.47 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 488 | 39.47 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 523 | 39.48 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 8 | 2 |
| 529 | 39.49 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 574 | 39.55 | wind | 1.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 593 | 39.66 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 597 | 39.68 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 621 | 39.73 | temperature | 25.0 | 30 | > th | dose independent | rect. | 3 | 8 |
| 626 | 39.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 11 |
| 637 | 39.79 | radiation | 40.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 673 | 39.86 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 698 | 39.94 | radiation | 20.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 735 | 40.00 | atmosphere | 1010.0 | 90 | < th | dose independent | sin | 5 | NA |
| 737 | 40.01 | atmosphere | 1010.0 | 30 | > th | dose independent | sin | 5 | NA |
| 822 | 40.10 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 15 |
| 875 | 40.19 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 985 | 40.24 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 987 | 40.24 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 3 |