Os10g0467200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pex2 / Pex12, N-terminal domain containing protein.
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Os10g0467200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pex2 / Pex12, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.31 | 0.19 | 10.1 | -0.113 | 0.571 | 0.777 | -0.0961 | -0.959 | 0.0111 | 0.894 | 30.73 | 211 | -- | -- |
| 17.18 | 0.193 | 10.1 | -0.254 | 0.553 | 0.827 | -0.308 | -- | -0.00335 | 0.675 | 29.9 | 215 | -- | -- |
| 16.33 | 0.188 | 10.1 | -0.102 | 0.566 | 0.78 | -- | -1 | 0.0183 | 0.936 | 30.58 | 194 | -- | -- |
| 17.44 | 0.195 | 10.1 | -0.273 | 0.562 | 0.79 | -- | -- | -0.0206 | 0.793 | 30.04 | 219 | -- | -- |
| 27.88 | 0.247 | 10.1 | -0.0171 | -- | 1.25 | -- | -0.886 | 0.0999 | -- | 30.58 | 194 | -- | -- |
| 24.97 | 0.234 | 10.2 | -0.469 | 0.753 | -- | -0.192 | -- | -0.176 | 1.77 | -- | -- | -- | -- |
| 25.11 | 0.235 | 10.2 | -0.463 | 0.753 | -- | -- | -- | -0.175 | 1.79 | -- | -- | -- | -- |
| 28.89 | 0.251 | 10.1 | -0.16 | -- | 1.23 | -- | -- | 0.0679 | -- | 30.04 | 219 | -- | -- |
| 19.15 | 0.204 | 10.1 | -- | 0.536 | 0.882 | -- | -- | 0.0218 | 0.672 | 29.86 | 200 | -- | -- |
| 59.52 | 0.36 | 10.2 | -0.432 | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
| 30.75 | 0.259 | 10.2 | -- | 0.744 | -- | -- | -- | -0.124 | 1.77 | -- | -- | -- | -- |
| 29.53 | 0.254 | 10.1 | -- | -- | 1.27 | -- | -- | 0.0926 | -- | 30.04 | 219 | -- | -- |
| 64.43 | 0.375 | 10.2 | -- | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 3 | 16.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 4 | 16.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 7 | 16.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 17 |
| 12 | 16.26 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 13 | 16.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 39 | 16.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 20 |
| 43 | 16.46 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 44 | 16.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 46 | 16.49 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 47 | 16.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 74 | 16.60 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 87 | 16.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 90 | 16.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 96 | 16.67 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 112 | 16.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 160 | 16.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 162 | 16.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 169 | 16.81 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 182 | 16.84 | temperature | 15 | 720 | > th | dose dependent | sin | 3 | NA |
| 183 | 16.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 214 | 16.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 241 | 16.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 246 | 16.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 250 | 16.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 251 | 16.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 266 | 16.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 578 | 17.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 582 | 17.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 589 | 17.06 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 619 | 17.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 623 | 17.07 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 624 | 17.07 | temperature | 30 | 90 | < th | dose dependent | sin | 21 | NA |
| 628 | 17.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 765 | 17.10 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 822 | 17.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 877 | 17.12 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 957 | 17.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 4 |