Os10g0467000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0467000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.65 | 0.389 | 10.3 | 0.0228 | 0.19 | -1.56 | 0.967 | -0.26 | -0.00171 | 20.7 | 27.35 | 83 | -- | -- |
| 68.69 | 0.386 | 10.3 | 0.0146 | 0.201 | -1.52 | 0.921 | -- | 0.011 | 20.3 | 27.35 | 76 | -- | -- |
| 70.89 | 0.392 | 10.3 | -0.0299 | 0.25 | -1.45 | -- | 0.0764 | 0.0061 | 18.7 | 27.1 | 60 | -- | -- |
| 70.9 | 0.392 | 10.3 | -0.0212 | 0.248 | -1.46 | -- | -- | 0.00745 | 18.7 | 27.1 | 63 | -- | -- |
| 73.55 | 0.399 | 10.3 | -0.0554 | -- | -1.53 | -- | 0.0636 | -0.0108 | -- | 27.52 | 87 | -- | -- |
| 100.74 | 0.471 | 10.2 | 0.34 | 0.559 | -- | 0.0371 | -- | 0.329 | 16.1 | -- | -- | -- | -- |
| 100.75 | 0.47 | 10.2 | 0.341 | 0.559 | -- | -- | -- | 0.329 | 16 | -- | -- | -- | -- |
| 73.5 | 0.399 | 10.3 | -0.0561 | -- | -1.54 | -- | -- | -0.00785 | -- | 27.59 | 93 | -- | -- |
| 70.91 | 0.392 | 10.3 | -- | 0.25 | -1.45 | -- | -- | 0.0116 | 18.7 | 27.1 | 62 | -- | -- |
| 117.78 | 0.507 | 10.2 | 0.318 | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
| 103.81 | 0.477 | 10.2 | -- | 0.552 | -- | -- | -- | 0.291 | 16 | -- | -- | -- | -- |
| 73.54 | 0.399 | 10.3 | -- | -- | -1.53 | -- | -- | 0.000328 | -- | 27.6 | 107 | -- | -- |
| 120.44 | 0.512 | 10.2 | -- | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 18 |
| 5 | 67.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 20 |
| 16 | 68.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 18 | 68.33 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 29 | 68.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 39 | 69.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 57 | 70.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 98 | 71.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 105 | 71.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 107 | 71.50 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 125 | 71.89 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 159 | 72.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 163 | 72.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 213 | 72.61 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 215 | 72.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 218 | 72.64 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 228 | 72.78 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 266 | 72.98 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 13 |
| 286 | 73.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 301 | 73.22 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 341 | 73.54 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 20 |
| 374 | 73.82 | temperature | 10 | 30 | > th | dose dependent | sin | 13 | NA |
| 378 | 73.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 402 | 73.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 20 |
| 419 | 74.07 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 427 | 74.14 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 431 | 74.17 | temperature | 30 | 30 | < th | dose dependent | sin | 13 | NA |
| 467 | 74.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 514 | 74.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 11 |
| 590 | 75.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 16 |
| 647 | 75.24 | temperature | 25 | 90 | < th | dose dependent | sin | 18 | NA |
| 893 | 76.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 13 |
| 974 | 76.47 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 22 |