Os10g0466500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CCT domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0466500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : CCT domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.01 | 0.625 | 5.01 | -2.95 | 0.165 | -0.97 | 2.65 | 3.71 | -0.571 | 19.4 | 69.53 | 405 | -- | -- |
| 194.65 | 0.65 | 5.03 | -2.66 | 0.378 | -0.839 | 1.19 | -- | -0.516 | 21.5 | 67.44 | 247 | -- | -- |
| 185.55 | 0.634 | 5.02 | -2.89 | 0.467 | -0.89 | -- | 1.96 | -0.522 | 21.8 | 64.8 | 144 | -- | -- |
| 198.21 | 0.656 | 5.01 | -2.81 | 0.512 | -0.944 | -- | -- | -0.484 | 21.7 | 58.7 | 137 | -- | -- |
| 190.82 | 0.643 | 5 | -2.96 | -- | -1.37 | -- | 3.3 | -0.511 | -- | 49.1 | 328 | -- | -- |
| 212.93 | 0.684 | 5.01 | -2.8 | 0.779 | -- | 0.803 | -- | -0.448 | 18.5 | -- | -- | -- | -- |
| 214.17 | 0.685 | 5.01 | -2.81 | 0.788 | -- | -- | -- | -0.445 | 18.1 | -- | -- | -- | -- |
| 205.07 | 0.667 | 5.01 | -2.81 | -- | -1.07 | -- | -- | -0.515 | -- | 62.48 | 397 | -- | -- |
| 401.39 | 0.933 | 4.97 | -- | 0.369 | -0.942 | -- | -- | -0.245 | 22.4 | 81.75 | 185 | -- | -- |
| 246.35 | 0.733 | 4.99 | -2.83 | -- | -- | -- | -- | -0.462 | -- | -- | -- | -- | -- |
| 422.27 | 0.961 | 4.94 | -- | 0.83 | -- | -- | -- | -0.132 | 17.9 | -- | -- | -- | -- |
| 393.43 | 0.924 | 4.96 | -- | -- | -1.27 | -- | -- | -0.317 | -- | 82 | 388 | -- | -- |
| 457.95 | 0.999 | 4.92 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.39 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 2 | 165.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 15 |
| 9 | 167.50 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 15 | 168.73 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 10 |
| 27 | 170.07 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 80 | 172.43 | temperature | 25.0 | 10 | < th | dose dependent | sin | 18 | NA |
| 85 | 172.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 97 | 173.07 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 9 |
| 123 | 173.67 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 125 | 173.74 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 126 | 173.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 127 | 173.79 | temperature | 25.0 | 720 | < th | dose dependent | sin | 21 | NA |
| 153 | 174.40 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 170 | 174.65 | humidity | 90.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 200 | 175.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 205 | 175.06 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 208 | 175.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 7 |
| 210 | 175.11 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 17 |
| 224 | 175.28 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 231 | 175.34 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 242 | 175.45 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 8 |
| 246 | 175.50 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 248 | 175.55 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 249 | 175.57 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 271 | 175.71 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 11 |
| 349 | 176.22 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 351 | 176.22 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 360 | 176.29 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 367 | 176.35 | temperature | 10.0 | 10 | > th | dose dependent | sin | 16 | NA |
| 371 | 176.37 | humidity | 90.0 | 720 | < th | dose independent | sin | 23 | NA |
| 441 | 176.75 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 467 | 176.94 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 471 | 176.94 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 483 | 177.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 501 | 177.11 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 518 | 177.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 564 | 177.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 571 | 177.44 | humidity | 90.0 | 720 | > th | dose independent | sin | 21 | NA |
| 582 | 177.50 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 605 | 177.60 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 22 | 17 |
| 608 | 177.62 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 610 | 177.63 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 629 | 177.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 630 | 177.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 665 | 177.87 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 22 | 8 |
| 677 | 177.91 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 17 |
| 697 | 178.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 22 |
| 725 | 178.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 726 | 178.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 728 | 178.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 732 | 178.15 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 11 |
| 744 | 178.19 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 747 | 178.19 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 750 | 178.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 757 | 178.24 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 760 | 178.28 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 824 | 178.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 834 | 178.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 843 | 178.59 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 854 | 178.65 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 867 | 178.69 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 14 |
| 895 | 178.79 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 912 | 178.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 928 | 178.89 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 935 | 178.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 958 | 178.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 959 | 178.99 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 961 | 178.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 962 | 178.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |