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Os10g0464100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.8 (0.0104) R2 : 0.119
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.173 (0.022) R2dN8 : 0.154 R2N8 : 0.119
σ : 0.197
deviance : 17.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.28 0.171 9.79 0.225 0.136 0.222 -0.589 -0.727 -0.108 12.3 81.96 38 -- --
14.56 0.178 9.78 0.176 0.139 0.202 -0.216 -- -0.115 12 82.64 51 -- --
14.19 0.175 9.78 0.171 0.141 0.229 -- -0.4 -0.114 12.2 82.85 51 -- --
14.7 0.179 9.78 0.166 0.158 0.233 -- -- -0.113 12.8 82.36 51 -- --
13.54 0.171 9.78 0.259 -- 0.247 -- -0.757 -0.0893 -- 71.97 858 -- --
15.92 0.187 9.79 0.202 0.0925 -- -0.341 -- -0.152 8.78 -- -- -- --
16.29 0.189 9.79 0.189 0.0974 -- -- -- -0.153 8 -- -- -- --
15.16 0.181 9.79 0.186 -- 0.249 -- -- -0.128 -- 72.74 839 -- --
15.42 0.183 9.78 -- 0.158 0.243 -- -- -0.128 12.8 83 51 -- --
16.81 0.192 9.79 0.19 -- -- -- -- -0.152 -- -- -- -- --
17.24 0.194 9.79 -- 0.0987 -- -- -- -0.174 7.86 -- -- -- --
16.03 0.186 9.79 -- -- 0.259 -- -- -0.144 -- 78 852 -- --
17.76 0.197 9.8 -- -- -- -- -- -0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.84 humidity 90 30 < th dose independent rect. 16 23
2 12.98 humidity 90 720 > th dose dependent rect. 10 13
9 13.08 humidity 50 720 > th dose dependent rect. 17 6
12 13.12 humidity 80 1440 > th dose independent rect. 10 4
13 13.12 humidity 80 1440 > th dose independent rect. 9 12
15 13.13 humidity 80 1440 < th dose independent rect. 10 4
19 13.14 humidity 80 1440 > th dose independent rect. 10 7
20 13.14 humidity 80 1440 > th dose independent rect. 9 10
21 13.14 humidity 80 1440 > th dose dependent rect. 10 7
28 13.16 humidity 80 1440 > th dose independent sin 23 NA
39 13.17 humidity 80 1440 < th dose independent rect. 11 2
41 13.17 humidity 80 1440 < th dose independent rect. 10 8
44 13.17 humidity 80 1440 < th dose independent rect. 9 11
51 13.18 humidity 70 1440 > th dose dependent rect. 11 2
55 13.19 humidity 80 1440 < th dose independent sin 23 NA
56 13.19 humidity 80 1440 > th dose independent rect. 11 2
59 13.19 humidity 80 1440 > th dose independent rect. 1 20
74 13.21 humidity 80 1440 > th dose independent rect. 5 16
77 13.21 humidity 90 720 > th dose dependent sin 20 NA
109 13.24 humidity 90 30 < th dose independent rect. 5 23
113 13.24 humidity 70 720 > th dose dependent rect. 2 21
125 13.26 humidity 80 1440 < th dose independent rect. 2 19
134 13.26 humidity 80 720 > th dose dependent rect. 4 19
153 13.27 humidity 90 90 > th dose dependent rect. 5 22
186 13.29 humidity 90 30 < th dose independent rect. 7 23
187 13.29 humidity 70 1440 > th dose dependent sin 22 NA
211 13.30 humidity 80 1440 < th dose independent rect. 21 21
254 13.32 humidity 80 1440 > th dose independent rect. 20 23
262 13.33 radiation 1 1440 > th dose independent rect. 10 2
277 13.33 humidity 90 30 < th dose independent rect. 7 21
294 13.34 radiation 1 1440 > th dose independent rect. 9 21
304 13.34 humidity 80 90 > th dose dependent rect. 11 21
320 13.35 radiation 1 1440 < th dose dependent rect. 10 6
329 13.35 radiation 1 720 < th dose dependent rect. 4 19
335 13.36 humidity 80 1440 > th dose independent rect. 8 19
352 13.36 humidity 80 30 > th dose dependent rect. 21 23
356 13.37 radiation 1 1440 > th dose independent rect. 9 10
369 13.37 humidity 80 1440 < th dose independent rect. 9 18
387 13.37 radiation 1 1440 < th dose independent rect. 9 21
401 13.37 radiation 1 1440 < th dose dependent rect. 12 4
409 13.38 humidity 80 1440 > th dose independent no NA NA
410 13.38 humidity 90 30 < th dose independent no NA NA
452 13.38 humidity 90 30 < th dose independent rect. 3 23
455 13.38 humidity 80 1440 < th dose independent rect. 15 23
473 13.39 humidity 80 1440 < th dose independent no NA NA
474 13.39 radiation 1 1440 < th dose independent rect. 9 10
491 13.39 radiation 1 1440 > th dose independent rect. 12 18
507 13.39 humidity 80 1440 > th dose independent rect. 15 23
514 13.39 humidity 90 30 < th dose independent rect. 20 23
568 13.40 humidity 90 30 < th dose independent rect. 5 21
606 13.41 humidity 80 30 > th dose dependent rect. 15 18
627 13.42 radiation 1 1440 < th dose independent rect. 12 18
637 13.42 humidity 70 720 > th dose dependent rect. 15 8
649 13.43 radiation 1 1440 > th dose independent sin 19 NA
663 13.43 humidity 80 720 > th dose dependent rect. 20 1
676 13.43 humidity 70 720 > th dose dependent rect. 9 22
681 13.44 radiation 1 1440 > th dose independent rect. 13 2
682 13.44 radiation 1 1440 > th dose independent rect. 12 7
741 13.44 radiation 1 1440 < th dose dependent rect. 9 21
742 13.44 humidity 80 30 > th dose dependent rect. 13 23
744 13.45 radiation 1 1440 < th dose independent sin 19 NA
746 13.45 radiation 1 1440 < th dose independent rect. 12 7
762 13.45 humidity 90 30 < th dose independent rect. 7 19
771 13.45 humidity 80 30 > th dose dependent no NA NA
773 13.45 humidity 90 720 > th dose dependent rect. 20 3
789 13.45 humidity 80 30 > th dose dependent rect. 15 23
790 13.45 humidity 80 30 > th dose dependent rect. 17 23
791 13.45 humidity 80 30 > th dose dependent rect. 19 23
794 13.46 radiation 1 1440 < th dose independent rect. 10 1
795 13.46 radiation 1 1440 < th dose independent rect. 13 2
832 13.46 radiation 1 1440 < th dose dependent rect. 10 1
849 13.46 humidity 80 30 > th dose dependent rect. 21 21
865 13.47 radiation 1 720 < th dose independent rect. 4 19
879 13.47 radiation 1 720 < th dose dependent rect. 13 19
894 13.47 humidity 80 30 > th dose dependent rect. 1 23
898 13.47 humidity 70 720 > th dose dependent rect. 17 23
915 13.48 humidity 90 30 < th dose independent rect. 23 23
948 13.48 humidity 90 90 > th dose dependent rect. 5 20
958 13.48 radiation 1 720 < th dose dependent rect. 4 23
968 13.49 humidity 90 30 < th dose independent rect. 20 19
976 13.49 humidity 90 30 < th dose independent rect. 9 23