Os10g0462100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0462100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.25 | 0.217 | 13.4 | -0.0435 | 1.18 | 0.239 | -0.151 | -4.27 | 0.393 | 22.2 | 30 | 1402 | -- | -- |
| 24.89 | 0.234 | 13.3 | 0.81 | 1.17 | -0.231 | -0.22 | -- | 0.485 | 21.9 | 30 | 1402 | -- | -- |
| 21.34 | 0.215 | 13.4 | -0.0422 | 1.18 | 0.24 | -- | -4.29 | 0.393 | 22.2 | 30 | 1402 | -- | -- |
| 23.14 | 0.226 | 13.3 | 0.861 | 1.13 | -0.245 | -- | -- | 0.536 | 21.5 | 27.3 | 43573 | -- | -- |
| 105.31 | 0.481 | 13.2 | 0.98 | -- | -0.492 | -- | 1.62 | 0.497 | -- | 30.1 | 1430 | -- | -- |
| 26.58 | 0.242 | 13.3 | 0.786 | 1.18 | -- | -0.214 | -- | 0.491 | 22.1 | -- | -- | -- | -- |
| 26.76 | 0.242 | 13.3 | 0.794 | 1.18 | -- | -- | -- | 0.491 | 22.1 | -- | -- | -- | -- |
| 93.65 | 0.451 | 13.3 | 0.675 | -- | 0.595 | -- | -- | 0.28 | -- | 25.3 | 768 | -- | -- |
| 30.74 | 0.258 | 13.3 | -- | 1.18 | 0.601 | -- | -- | 0.287 | 22.1 | 16.6 | 47520 | -- | -- |
| 111.12 | 0.493 | 13.2 | 0.81 | -- | -- | -- | -- | 0.493 | -- | -- | -- | -- | -- |
| 43.39 | 0.308 | 13.3 | -- | 1.19 | -- | -- | -- | 0.403 | 22.1 | -- | -- | -- | -- |
| 102.73 | 0.472 | 13.3 | -- | -- | 0.739 | -- | -- | 0.164 | -- | 25.26 | 759 | -- | -- |
| 128.43 | 0.529 | 13.3 | -- | -- | -- | -- | -- | 0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.93 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 2 | 20.94 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 37 | 21.09 | temperature | 30 | 1440 | > th | dose independent | sin | 4 | NA |
| 45 | 21.15 | temperature | 30 | 1440 | < th | dose independent | sin | 6 | NA |
| 46 | 21.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 47 | 21.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 48 | 21.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 49 | 21.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 50 | 21.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 52 | 21.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 81 | 21.20 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 177 | 21.31 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 299 | 21.35 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 433 | 21.45 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 440 | 21.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 442 | 21.47 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 480 | 21.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 495 | 21.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 637 | 21.50 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 780 | 21.54 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 823 | 21.56 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 904 | 21.59 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 999 | 21.59 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 1000 | 21.59 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 16 |