Os10g0459900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0459900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.94 | 0.278 | 9.54 | 0.15 | 0.786 | -0.864 | 0.216 | 0.217 | -0.305 | 22.1 | 21.57 | 3895 | -- | -- |
| 35.05 | 0.276 | 9.55 | 0.11 | 0.795 | -0.878 | 0.168 | -- | -0.315 | 22.1 | 21.5 | 3776 | -- | -- |
| 35.12 | 0.276 | 9.54 | 0.147 | 0.789 | -0.857 | -- | 0.242 | -0.304 | 22.1 | 21.59 | 3885 | -- | -- |
| 35.2 | 0.276 | 9.55 | 0.0623 | 0.794 | -0.869 | -- | -- | -0.325 | 22 | 21.5 | 3620 | -- | -- |
| 70.99 | 0.392 | 9.51 | 0.185 | -- | -0.841 | -- | 0.385 | -0.285 | -- | 21.5 | 4322 | -- | -- |
| 55.01 | 0.348 | 9.62 | -0.429 | 0.75 | -- | 0.183 | -- | -0.621 | 22 | -- | -- | -- | -- |
| 55.14 | 0.348 | 9.62 | -0.436 | 0.75 | -- | -- | -- | -0.621 | 21.9 | -- | -- | -- | -- |
| 70.55 | 0.391 | 9.54 | 0.0279 | -- | -0.846 | -- | -- | -0.357 | -- | 21.36 | 2968 | -- | -- |
| 35.28 | 0.277 | 9.55 | -- | 0.794 | -0.846 | -- | -- | -0.337 | 22 | 21.57 | 3618 | -- | -- |
| 88.9 | 0.441 | 9.6 | -0.428 | -- | -- | -- | -- | -0.621 | -- | -- | -- | -- | -- |
| 60.15 | 0.363 | 9.61 | -- | 0.749 | -- | -- | -- | -0.573 | 21.9 | -- | -- | -- | -- |
| 70.5 | 0.391 | 9.54 | -- | -- | -0.82 | -- | -- | -0.356 | -- | 21.53 | 2971 | -- | -- |
| 93.72 | 0.452 | 9.59 | -- | -- | -- | -- | -- | -0.574 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 3 | 32.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 4 | 32.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 6 | 32.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 15 | 32.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 55 | 32.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 60 | 32.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 62 | 32.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 63 | 32.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 64 | 32.91 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 66 | 32.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 74 | 32.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 93 | 33.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 179 | 33.37 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 249 | 33.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 14 |
| 250 | 33.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 278 | 33.70 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 331 | 33.84 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 383 | 33.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 390 | 34.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 424 | 34.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 443 | 34.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |