Os10g0459600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Xyloglucan galactosyltransferase KATAMARI 1 (EC 2.4.1.-) (MURUS3 protein).
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Os10g0459600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Xyloglucan galactosyltransferase KATAMARI 1 (EC 2.4.1.-) (MURUS3 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.05 | 0.361 | 3.05 | 0.0663 | 0.0977 | 0.928 | 0.102 | -2.64 | 0.0585 | 8.84 | 1015 | 10 | -- | -- |
| 61.9 | 0.369 | 3.05 | 0.028 | 0.0669 | 0.952 | 0.392 | -- | 0.0535 | 11.4 | 1015 | 10 | -- | -- |
| 59.06 | 0.361 | 3.05 | 0.0706 | 0.101 | 0.879 | -- | -2.6 | 0.058 | 8.07 | 1015 | 6 | -- | -- |
| 60.17 | 0.361 | 3.05 | 0.0983 | 0.0916 | 1.54 | -- | -- | 0.0688 | 10.2 | 1016 | 2 | -- | -- |
| 59.61 | 0.362 | 3.05 | 0.0715 | -- | 0.849 | -- | -2.61 | 0.0589 | -- | 1015 | 6 | -- | -- |
| 64.87 | 0.378 | 3.06 | 0.0253 | 0.0329 | -- | -0.491 | -- | 0.0402 | 2.76 | -- | -- | -- | -- |
| 65.33 | 0.379 | 3.05 | 0.0367 | 0.0898 | -- | -- | -- | 0.0423 | 7.04 | -- | -- | -- | -- |
| 60.6 | 0.363 | 3.05 | 0.0678 | -- | 1.53 | -- | -- | 0.0587 | -- | 1016 | 2 | -- | -- |
| 59.29 | 0.361 | 3.05 | -- | 0.103 | 1.76 | -- | -- | 0.0483 | 8.06 | 1016 | 2 | -- | -- |
| 65.76 | 0.379 | 3.05 | 0.0385 | -- | -- | -- | -- | 0.0439 | -- | -- | -- | -- | -- |
| 65.37 | 0.378 | 3.05 | -- | 0.0902 | -- | -- | -- | 0.0382 | 7.02 | -- | -- | -- | -- |
| 59.87 | 0.362 | 3.05 | -- | -- | 1.73 | -- | -- | 0.0493 | -- | 1016 | 2 | -- | -- |
| 65.8 | 0.379 | 3.05 | -- | -- | -- | -- | -- | 0.0396 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.03 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 4 | 53.07 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 53.08 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 53.11 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 53.12 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 53.18 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 15 | 53.21 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 19 | 53.24 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 20 | 53.25 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 53.27 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 25 | 53.28 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 29 | 53.30 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 31 | 53.30 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 53.30 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 36 | 53.30 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 38 | 53.30 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 43 | 53.30 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 44 | 53.30 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 45 | 53.30 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 53.30 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 61 | 53.49 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 62 | 53.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 65 | 53.49 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 69 | 53.49 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 78 | 53.49 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 79 | 53.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 99 | 53.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 112 | 53.57 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 116 | 53.69 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 124 | 53.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 132 | 54.23 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 175 | 54.84 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 176 | 54.84 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 178 | 55.07 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 195 | 56.75 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 199 | 56.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 200 | 56.97 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 208 | 57.43 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 216 | 57.81 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 10 |
| 217 | 57.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 23 |
| 218 | 57.91 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 219 | 57.97 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 16 | 10 |
| 231 | 58.40 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 15 |
| 264 | 58.62 | atmosphere | 1015.0 | 720 | < th | dose independent | sin | 20 | NA |
| 270 | 58.65 | atmosphere | 1015.0 | 10 | < th | dose independent | sin | 13 | NA |
| 273 | 58.65 | atmosphere | 1015.0 | 270 | < th | dose independent | sin | 15 | NA |
| 274 | 58.65 | atmosphere | 1015.0 | 30 | < th | dose independent | sin | 0 | NA |
| 359 | 58.99 | atmosphere | 1015.0 | 720 | > th | dose independent | sin | 21 | NA |
| 361 | 58.99 | atmosphere | 1015.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 362 | 58.99 | atmosphere | 1015.0 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 379 | 59.02 | atmosphere | 1015.0 | 720 | > th | dose independent | rect. | 3 | 21 |
| 384 | 59.03 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 23 | 5 |
| 385 | 59.04 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 386 | 59.04 | atmosphere | 1015.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 425 | 59.04 | atmosphere | 1015.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 463 | 59.05 | atmosphere | 1015.0 | 10 | > th | dose independent | sin | 7 | NA |
| 559 | 59.05 | atmosphere | 1015.0 | 10 | > th | dose independent | no | NA | NA |
| 566 | 59.05 | atmosphere | 1015.0 | 10 | < th | dose independent | no | NA | NA |
| 576 | 59.05 | atmosphere | 1015.0 | 10 | > th | dose independent | rect. | 23 | 1 |