Os10g0458900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exostosin-like family protein.
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Os10g0458900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exostosin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.94 | 0.533 | 2.87 | 0.104 | 0.117 | 5.53 | 0.241 | -8.59 | 0.023 | 10.7 | 1.441 | 34 | -- | -- |
| 130.94 | 0.533 | 2.86 | 0.122 | 0.117 | 3.14 | 0.241 | -- | 0.0231 | 10.7 | 1.488 | 21 | -- | -- |
| 131.17 | 0.533 | 2.87 | 0.113 | 0.117 | 5.47 | -- | -8.46 | 0.0233 | 10.3 | 1.427 | 33 | -- | -- |
| 131.17 | 0.533 | 2.86 | 0.132 | 0.117 | 3.12 | -- | -- | 0.0233 | 10.3 | 1.467 | 25 | -- | -- |
| 132 | 0.535 | 2.87 | 0.113 | -- | 5.36 | -- | -8.26 | 0.023 | -- | 1.416 | 34 | -- | -- |
| 140.64 | 0.556 | 2.86 | 0.155 | 0.0934 | -- | 0.192 | -- | 0.018 | 11.9 | -- | -- | -- | -- |
| 140.78 | 0.556 | 2.86 | 0.162 | 0.0951 | -- | -- | -- | 0.0183 | 11 | -- | -- | -- | -- |
| 132 | 0.535 | 2.86 | 0.131 | -- | 3.06 | -- | -- | 0.0229 | -- | 1.444 | 27 | -- | -- |
| 131.63 | 0.534 | 2.86 | -- | 0.117 | 3.15 | -- | -- | 0.00878 | 10.2 | 1.451 | 26 | -- | -- |
| 141.34 | 0.556 | 2.86 | 0.16 | -- | -- | -- | -- | 0.0176 | -- | -- | -- | -- | -- |
| 141.47 | 0.556 | 2.87 | -- | 0.0937 | -- | -- | -- | 0.000284 | 10.9 | -- | -- | -- | -- |
| 132.45 | 0.536 | 2.87 | -- | -- | 3.1 | -- | -- | 0.00858 | -- | 1.412 | 28 | -- | -- |
| 142.02 | 0.556 | 2.87 | -- | -- | -- | -- | -- | -0.000134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.76 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 2 | 127.20 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 4 | 127.20 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 127.21 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 12 | 127.27 | wind | 5.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 15 | 127.29 | wind | 5.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 25 | 128.76 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 27 | 128.86 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 39 | 129.39 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 43 | 129.39 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 21 | 3 |
| 47 | 129.39 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 51 | 129.39 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 21 | 3 |
| 55 | 129.40 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 1 |
| 61 | 129.40 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 63 | 129.40 | wind | 5.0 | 90 | > th | dose dependent | rect. | 12 | 2 |
| 70 | 129.76 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 5 |
| 108 | 130.93 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 2 |
| 122 | 130.93 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 136 | 130.94 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 148 | 130.94 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 175 | 131.25 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 181 | 131.48 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 19 |
| 183 | 131.54 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 211 | 131.86 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 214 | 131.90 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 222 | 131.93 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 15 |
| 224 | 131.94 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 18 | 12 |
| 226 | 131.98 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 15 | 5 |
| 249 | 132.02 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 18 | 17 |
| 296 | 132.20 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 18 | NA |
| 327 | 132.38 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 3 |
| 354 | 132.77 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 2 |
| 366 | 132.95 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 18 | 12 |
| 373 | 133.04 | wind | 5.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 391 | 133.14 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 19 |
| 400 | 133.21 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 14 |
| 404 | 133.26 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 405 | 133.26 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 461 | 133.28 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 15 | 5 |
| 499 | 133.52 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 4 |
| 516 | 133.60 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 15 |
| 568 | 133.78 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 14 |
| 620 | 133.97 | precipitation | 0.1 | 30 | > th | dose independent | sin | 17 | NA |
| 658 | 134.11 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 702 | 134.39 | precipitation | 0.1 | 30 | < th | dose independent | sin | 16 | NA |
| 705 | 134.39 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 16 | NA |
| 712 | 134.44 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 738 | 134.47 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 759 | 134.51 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 3 |
| 766 | 134.52 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 854 | 134.79 | precipitation | 0.1 | 30 | < th | dose independent | sin | 19 | NA |
| 857 | 134.79 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 19 | NA |
| 938 | 135.01 | radiation | 40.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 969 | 135.10 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 18 | 1 |