Os10g0458300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0458300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.07 | 0.643 | 2.54 | 2.47 | 0.0556 | -11.7 | 1.1 | 68.8 | -0.0702 | 18 | 1000 | 10 | -- | -- |
| 196.02 | 0.657 | 2.92 | 0.338 | 0.0709 | -0.382 | 1.12 | -- | -0.0778 | 17.7 | 994.9 | 19 | -- | -- |
| 189.06 | 0.645 | 2.53 | 2.52 | 0.114 | -11.9 | -- | 70.4 | -0.0642 | 14.2 | 1000 | 10 | -- | -- |
| 198.28 | 0.66 | 2.92 | 0.334 | 0.136 | -0.317 | -- | -- | -0.0717 | 13.9 | 994.9 | 19 | -- | -- |
| 189.83 | 0.645 | 2.53 | 2.54 | -- | -12.1 | -- | 71.4 | -0.0667 | -- | 1000 | 10 | -- | -- |
| 196.16 | 0.657 | 2.92 | 0.336 | 0.0665 | -- | 1.11 | -- | -0.077 | 17.7 | -- | -- | -- | -- |
| 198.38 | 0.66 | 2.92 | 0.333 | 0.133 | -- | -- | -- | -0.0711 | 13.9 | -- | -- | -- | -- |
| 199.03 | 0.66 | 2.92 | 0.339 | -- | -0.305 | -- | -- | -0.0789 | -- | 997.5 | 20 | -- | -- |
| 201.01 | 0.664 | 2.93 | -- | 0.131 | -0.331 | -- | -- | -0.111 | 14 | 996.2 | 22 | -- | -- |
| 199.45 | 0.66 | 2.92 | 0.327 | -- | -- | -- | -- | -0.0741 | -- | -- | -- | -- | -- |
| 201.3 | 0.664 | 2.93 | -- | 0.127 | -- | -- | -- | -0.108 | 13.8 | -- | -- | -- | -- |
| 202.03 | 0.664 | 2.93 | -- | -- | -0.233 | -- | -- | -0.115 | -- | 997.5 | 11 | -- | -- |
| 202.28 | 0.664 | 2.93 | -- | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 173.68 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 11 | 3 |
| 3 | 175.68 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 7 | 176.12 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 14 | 176.61 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 11 | 4 |
| 25 | 177.19 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 35 | 178.94 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 10 | 1 |
| 39 | 179.30 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 10 |
| 71 | 180.01 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 100 | 180.51 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 103 | 180.52 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 109 | 180.57 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 111 | 180.57 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 124 | 180.94 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 9 |
| 132 | 180.94 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 140 | 181.01 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 4 |
| 172 | 181.02 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 173 | 181.02 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 199 | 181.04 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 223 | 181.11 | wind | 5.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 243 | 181.12 | wind | 5.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 255 | 181.22 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 5 | 10 |
| 322 | 181.71 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 11 | 11 |
| 337 | 181.80 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 11 | 9 |
| 374 | 182.07 | wind | 5.0 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 384 | 182.14 | wind | 7.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 389 | 182.16 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 418 | 182.58 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 465 | 182.78 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 466 | 182.81 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 467 | 182.81 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 18 | 9 |
| 476 | 182.92 | wind | 7.0 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 490 | 183.01 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 11 | 11 |
| 503 | 183.11 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 11 | 9 |
| 511 | 183.17 | atmosphere | 1000.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 550 | 183.47 | atmosphere | 1000.0 | 30 | < th | dose independent | sin | 23 | NA |
| 572 | 183.82 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 578 | 183.85 | wind | 7.0 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 581 | 183.88 | wind | 7.0 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 588 | 183.94 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 17 | 22 |
| 591 | 183.98 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 612 | 184.12 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 21 | NA |
| 638 | 184.23 | wind | 7.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 643 | 184.24 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 720 | 184.52 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 11 |
| 761 | 184.64 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 4 | 18 |
| 863 | 184.79 | wind | 7.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 880 | 184.81 | wind | 7.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 951 | 184.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 10 |
| 965 | 184.95 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 5 |
| 971 | 184.95 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 980 | 184.97 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 3 |
| 999 | 184.99 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 2 |