Os10g0457100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0457100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 427.75 | 0.972 | 4.44 | -3.84 | 0.773 | -1.78 | -0.825 | 3.48 | 0.0605 | 3.8 | 31.51 | 1242 | -- | -- |
| 428.36 | 0.964 | 4.37 | -3.26 | 0.78 | -1.38 | -0.915 | -- | 0.0622 | 3.68 | 31.8 | 1271 | -- | -- |
| 429.63 | 0.965 | 4.44 | -3.91 | 0.78 | -1.81 | -- | 3.92 | 0.0737 | 3.91 | 31.5 | 1268 | -- | -- |
| 430.28 | 0.966 | 4.36 | -3.21 | 0.762 | -1.39 | -- | -- | 0.0619 | 3.95 | 31.8 | 1233 | -- | -- |
| 461.76 | 1 | 4.42 | -3.72 | -- | -1.81 | -- | 2.87 | 0.103 | -- | 31.59 | 1233 | -- | -- |
| 524.23 | 1.07 | 4.43 | -2.86 | 0.942 | -- | -0.521 | -- | -0.217 | 3.38 | -- | -- | -- | -- |
| 525.08 | 1.07 | 4.43 | -2.85 | 0.941 | -- | -- | -- | -0.214 | 3.43 | -- | -- | -- | -- |
| 461.93 | 1 | 4.36 | -3.22 | -- | -1.5 | -- | -- | 0.101 | -- | 31.74 | 1227 | -- | -- |
| 692.28 | 1.23 | 4.31 | -- | 0.758 | -0.983 | -- | -- | 0.312 | 3.89 | 32.37 | 1161 | -- | -- |
| 574.82 | 1.12 | 4.43 | -2.81 | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
| 739.5 | 1.27 | 4.36 | -- | 0.885 | -- | -- | -- | 0.103 | 3.44 | -- | -- | -- | -- |
| 723.21 | 1.25 | 4.31 | -- | -- | -1.09 | -- | -- | 0.345 | -- | 32.4 | 1161 | -- | -- |
| 783.48 | 1.31 | 4.36 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 417.04 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 2 | 417.11 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 14 | 418.89 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 15 | 418.96 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 30 | 420.56 | wind | 7 | 43200 | > th | dose dependent | rect. | 21 | 18 |
| 48 | 421.69 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 51 | 421.88 | wind | 7 | 43200 | > th | dose dependent | sin | 5 | NA |
| 53 | 422.03 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 54 | 422.06 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 66 | 422.19 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 94 | 422.83 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 107 | 423.99 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 121 | 424.00 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 124 | 424.09 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 132 | 424.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 160 | 424.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 175 | 425.06 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 176 | 425.07 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 179 | 425.14 | wind | 7 | 43200 | < th | dose independent | sin | 4 | NA |
| 182 | 425.24 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 183 | 425.27 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 186 | 425.34 | wind | 7 | 43200 | > th | dose independent | sin | 4 | NA |
| 236 | 425.99 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 247 | 426.25 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 275 | 426.92 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 18 |
| 277 | 426.95 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 285 | 427.12 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 307 | 427.62 | temperature | 30 | 1440 | > th | dose dependent | sin | 13 | NA |
| 381 | 428.27 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 403 | 428.54 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 421 | 428.59 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 481 | 428.83 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 604 | 429.89 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 666 | 430.29 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 727 | 430.54 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 19 |
| 828 | 431.17 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 934 | 431.20 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 23 |