Os10g0456900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : von Willebrand factor, type A domain containing protein.
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Os10g0456900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : von Willebrand factor, type A domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.56 | 0.447 | 9.83 | 1.51 | 1.89 | -0.835 | 0.538 | 2.91 | 0.461 | 18.4 | 23 | 1229 | -- | -- |
| 97.14 | 0.459 | 9.92 | 0.782 | 1.89 | -0.588 | 0.533 | -- | 0.252 | 18.2 | 20.08 | 5478 | -- | -- |
| 91.26 | 0.445 | 9.83 | 1.49 | 1.89 | -0.843 | -- | 2.9 | 0.461 | 18.4 | 23 | 1213 | -- | -- |
| 97.9 | 0.461 | 9.92 | 0.811 | 1.93 | -0.644 | -- | -- | 0.279 | 18.3 | 18.34 | 5351 | -- | -- |
| 273.3 | 0.774 | 9.91 | 0.563 | -- | 0.784 | -- | 2.03 | 0.0456 | -- | 23.8 | 1301 | -- | -- |
| 106.55 | 0.484 | 9.95 | 0.49 | 1.91 | -- | 0.59 | -- | 0.114 | 18.1 | -- | -- | -- | -- |
| 107.4 | 0.485 | 9.95 | 0.484 | 1.92 | -- | -- | -- | 0.116 | 18.2 | -- | -- | -- | -- |
| 275.8 | 0.777 | 9.94 | 0.288 | -- | 0.93 | -- | -- | -0.0362 | -- | 23.8 | 1301 | -- | -- |
| 110.09 | 0.489 | 9.94 | -- | 1.92 | -0.305 | -- | -- | 0.157 | 18.2 | 22.57 | 4277 | -- | -- |
| 297.64 | 0.806 | 9.91 | 0.431 | -- | -- | -- | -- | 0.0738 | -- | -- | -- | -- | -- |
| 113.58 | 0.499 | 9.96 | -- | 1.91 | -- | -- | -- | 0.0623 | 18.2 | -- | -- | -- | -- |
| 277.35 | 0.778 | 9.95 | -- | -- | 0.987 | -- | -- | -0.0712 | -- | 23.9 | 1297 | -- | -- |
| 302.53 | 0.812 | 9.93 | -- | -- | -- | -- | -- | 0.026 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.57 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 14 |
| 4 | 81.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 8 | 82.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 11 | 83.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 17 | 83.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 12 |
| 18 | 83.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 12 |
| 27 | 83.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 36 | 84.29 | temperature | 30 | 10 | < th | dose dependent | sin | 10 | NA |
| 44 | 84.62 | temperature | 20 | 10 | > th | dose dependent | sin | 10 | NA |
| 50 | 84.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 52 | 84.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 10 |
| 80 | 85.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 135 | 86.66 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 8 |
| 140 | 86.72 | temperature | 25 | 10 | > th | dose independent | rect. | 16 | 17 |
| 141 | 86.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 146 | 86.76 | temperature | 25 | 30 | > th | dose independent | rect. | 19 | 14 |
| 222 | 87.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 252 | 87.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 256 | 87.85 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 267 | 87.94 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 270 | 87.96 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 337 | 88.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 344 | 88.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 364 | 88.47 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 10 |
| 384 | 88.56 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 409 | 88.70 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 2 |
| 447 | 88.87 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 5 |
| 454 | 88.90 | humidity | 90 | 90 | < th | dose independent | rect. | 4 | 5 |
| 540 | 89.26 | humidity | 90 | 90 | < th | dose independent | rect. | 6 | 3 |
| 567 | 89.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 571 | 89.40 | humidity | 90 | 10 | < th | dose independent | rect. | 6 | 3 |
| 601 | 89.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 635 | 89.60 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 14 |
| 698 | 89.80 | temperature | 25 | 30 | < th | dose independent | rect. | 22 | 8 |
| 728 | 89.89 | temperature | 25 | 720 | < th | dose independent | sin | 15 | NA |
| 844 | 90.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 979 | 90.47 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 9 |